Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC33.2■■■□□ 2.9
RIMBP3Q9UFD9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC33.2■■■□□ 2.9
RIMBP3Q9UFD9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC33.2■■■□□ 2.9
RIMBP3Q9UFD9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC33.2■■■□□ 2.9
RIMBP3Q9UFD9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
RIMBP3Q9UFD9 IER3-202ENST00000376377 1350 ntBASIC33.19■■■□□ 2.9
RIMBP3Q9UFD9 C2orf69P3-201ENST00000565542 1120 ntBASIC33.19■■■□□ 2.9
RIMBP3Q9UFD9 KLK8-205ENST00000593490 267 ntTSL 3 BASIC33.19■■■□□ 2.9
RIMBP3Q9UFD9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC33.19■■■□□ 2.9
RIMBP3Q9UFD9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
RIMBP3Q9UFD9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
RIMBP3Q9UFD9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC33.18■■■□□ 2.9
RIMBP3Q9UFD9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC33.18■■■□□ 2.9
RIMBP3Q9UFD9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
RIMBP3Q9UFD9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC33.18■■■□□ 2.9
RIMBP3Q9UFD9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
RIMBP3Q9UFD9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
RIMBP3Q9UFD9 AL121956.5-201ENST00000625261 221 ntBASIC33.17■■■□□ 2.9
RIMBP3Q9UFD9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC33.17■■■□□ 2.9
RIMBP3Q9UFD9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
RIMBP3Q9UFD9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
RIMBP3Q9UFD9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC33.17■■■□□ 2.9
RIMBP3Q9UFD9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC33.17■■■□□ 2.9
RIMBP3Q9UFD9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC33.17■■■□□ 2.9
RIMBP3Q9UFD9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
RIMBP3Q9UFD9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC33.17■■■□□ 2.9
RIMBP3Q9UFD9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
RIMBP3Q9UFD9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
RIMBP3Q9UFD9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
RIMBP3Q9UFD9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC33.17■■■□□ 2.9
RIMBP3Q9UFD9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC33.17■■■□□ 2.9
RIMBP3Q9UFD9 AL121906.2-201ENST00000621597 723 ntBASIC33.17■■■□□ 2.9
RIMBP3Q9UFD9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
RIMBP3Q9UFD9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
RIMBP3Q9UFD9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
RIMBP3Q9UFD9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC33.16■■■□□ 2.9
RIMBP3Q9UFD9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC33.16■■■□□ 2.9
RIMBP3Q9UFD9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC33.16■■■□□ 2.9
RIMBP3Q9UFD9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC33.16■■■□□ 2.9
RIMBP3Q9UFD9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC33.15■■■□□ 2.9
RIMBP3Q9UFD9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC33.15■■■□□ 2.9
RIMBP3Q9UFD9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC33.15■■■□□ 2.9
RIMBP3Q9UFD9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
RIMBP3Q9UFD9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
RIMBP3Q9UFD9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC33.15■■■□□ 2.9
RIMBP3Q9UFD9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC33.15■■■□□ 2.9
RIMBP3Q9UFD9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
RIMBP3Q9UFD9 NBPF21P-201ENST00000425093 1451 ntBASIC33.14■■■□□ 2.9
RIMBP3Q9UFD9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
RIMBP3Q9UFD9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
RIMBP3Q9UFD9 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
RIMBP3Q9UFD9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC33.14■■■□□ 2.9
RIMBP3Q9UFD9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.9
RIMBP3Q9UFD9 SLC25A1P4-201ENST00000567977 778 ntBASIC33.14■■■□□ 2.9
RIMBP3Q9UFD9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC33.14■■■□□ 2.9
RIMBP3Q9UFD9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC33.14■■■□□ 2.9
RIMBP3Q9UFD9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC33.14■■■□□ 2.9
RIMBP3Q9UFD9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC33.14■■■□□ 2.9
RIMBP3Q9UFD9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
RIMBP3Q9UFD9 FAM207BP-201ENST00000447172 505 ntBASIC33.13■■■□□ 2.89
RIMBP3Q9UFD9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC33.13■■■□□ 2.89
RIMBP3Q9UFD9 AL121829.2-201ENST00000620908 328 ntBASIC33.13■■■□□ 2.89
RIMBP3Q9UFD9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC33.13■■■□□ 2.89
RIMBP3Q9UFD9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC33.13■■■□□ 2.89
RIMBP3Q9UFD9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC33.13■■■□□ 2.89
RIMBP3Q9UFD9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC33.13■■■□□ 2.89
RIMBP3Q9UFD9 AC069148.1-201ENST00000608741 768 ntBASIC33.13■■■□□ 2.89
RIMBP3Q9UFD9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC33.13■■■□□ 2.89
RIMBP3Q9UFD9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
RIMBP3Q9UFD9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC33.12■■■□□ 2.89
RIMBP3Q9UFD9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC33.12■■■□□ 2.89
RIMBP3Q9UFD9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC33.11■■■□□ 2.89
RIMBP3Q9UFD9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
RIMBP3Q9UFD9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC33.11■■■□□ 2.89
RIMBP3Q9UFD9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
RIMBP3Q9UFD9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
RIMBP3Q9UFD9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC33.11■■■□□ 2.89
RIMBP3Q9UFD9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC33.11■■■□□ 2.89
RIMBP3Q9UFD9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC33.11■■■□□ 2.89
RIMBP3Q9UFD9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC33.11■■■□□ 2.89
RIMBP3Q9UFD9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
RIMBP3Q9UFD9 AC116407.4-201ENST00000623319 1061 ntBASIC33.11■■■□□ 2.89
RIMBP3Q9UFD9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC33.11■■■□□ 2.89
RIMBP3Q9UFD9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
RIMBP3Q9UFD9 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
RIMBP3Q9UFD9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
RIMBP3Q9UFD9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC33.1■■■□□ 2.89
RIMBP3Q9UFD9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
RIMBP3Q9UFD9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
RIMBP3Q9UFD9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
RIMBP3Q9UFD9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
RIMBP3Q9UFD9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC33.1■■■□□ 2.89
RIMBP3Q9UFD9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC33.1■■■□□ 2.89
RIMBP3Q9UFD9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
RIMBP3Q9UFD9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC33.09■■■□□ 2.89
RIMBP3Q9UFD9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC33.09■■■□□ 2.89
RIMBP3Q9UFD9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC33.09■■■□□ 2.89
RIMBP3Q9UFD9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
RIMBP3Q9UFD9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC33.09■■■□□ 2.89
RIMBP3Q9UFD9 TSPY21P-201ENST00000433481 731 ntBASIC33.09■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms