Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DNMT3BQ9UBC3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DNMT3BQ9UBC3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.51■■□□□ 1.03
DNMT3BQ9UBC3 POM121L13P-201ENST00000422362 380 ntBASIC21.51■■□□□ 1.03
DNMT3BQ9UBC3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.51■■□□□ 1.03
DNMT3BQ9UBC3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DNMT3BQ9UBC3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.51■■□□□ 1.03
DNMT3BQ9UBC3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.51■■□□□ 1.03
DNMT3BQ9UBC3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DNMT3BQ9UBC3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
DNMT3BQ9UBC3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.51■■□□□ 1.03
DNMT3BQ9UBC3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DNMT3BQ9UBC3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
DNMT3BQ9UBC3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DNMT3BQ9UBC3 EP400NL-214ENST00000641289 2402 ntBASIC21.5■■□□□ 1.03
DNMT3BQ9UBC3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
DNMT3BQ9UBC3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DNMT3BQ9UBC3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DNMT3BQ9UBC3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DNMT3BQ9UBC3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.5■■□□□ 1.03
DNMT3BQ9UBC3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
DNMT3BQ9UBC3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.5■■□□□ 1.03
DNMT3BQ9UBC3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.5■■□□□ 1.03
DNMT3BQ9UBC3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DNMT3BQ9UBC3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DNMT3BQ9UBC3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
DNMT3BQ9UBC3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.5■■□□□ 1.03
DNMT3BQ9UBC3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DNMT3BQ9UBC3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.49■■□□□ 1.03
DNMT3BQ9UBC3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.49■■□□□ 1.03
DNMT3BQ9UBC3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DNMT3BQ9UBC3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.49■■□□□ 1.03
DNMT3BQ9UBC3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DNMT3BQ9UBC3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DNMT3BQ9UBC3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.49■■□□□ 1.03
DNMT3BQ9UBC3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.49■■□□□ 1.03
DNMT3BQ9UBC3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.49■■□□□ 1.03
DNMT3BQ9UBC3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.49■■□□□ 1.03
DNMT3BQ9UBC3 Z99916.2-201ENST00000604037 246 ntBASIC21.49■■□□□ 1.03
DNMT3BQ9UBC3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
DNMT3BQ9UBC3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
DNMT3BQ9UBC3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DNMT3BQ9UBC3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.49■■□□□ 1.03
DNMT3BQ9UBC3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DNMT3BQ9UBC3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DNMT3BQ9UBC3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.48■■□□□ 1.03
DNMT3BQ9UBC3 AC087633.2-202ENST00000565166 1439 ntBASIC21.48■■□□□ 1.03
DNMT3BQ9UBC3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DNMT3BQ9UBC3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DNMT3BQ9UBC3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DNMT3BQ9UBC3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DNMT3BQ9UBC3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DNMT3BQ9UBC3 MIR718-201ENST00000390190 70 ntBASIC21.48■■□□□ 1.03
DNMT3BQ9UBC3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
DNMT3BQ9UBC3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DNMT3BQ9UBC3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
DNMT3BQ9UBC3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
DNMT3BQ9UBC3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
DNMT3BQ9UBC3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DNMT3BQ9UBC3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
DNMT3BQ9UBC3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
DNMT3BQ9UBC3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DNMT3BQ9UBC3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.46■■□□□ 1.03
DNMT3BQ9UBC3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DNMT3BQ9UBC3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.46■■□□□ 1.03
DNMT3BQ9UBC3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.46■■□□□ 1.03
DNMT3BQ9UBC3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.46■■□□□ 1.03
DNMT3BQ9UBC3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.46■■□□□ 1.03
DNMT3BQ9UBC3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DNMT3BQ9UBC3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
DNMT3BQ9UBC3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DNMT3BQ9UBC3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.46■■□□□ 1.03
DNMT3BQ9UBC3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.46■■□□□ 1.03
DNMT3BQ9UBC3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
DNMT3BQ9UBC3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.45■■□□□ 1.03
DNMT3BQ9UBC3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
DNMT3BQ9UBC3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.45■■□□□ 1.02
DNMT3BQ9UBC3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DNMT3BQ9UBC3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.45■■□□□ 1.02
DNMT3BQ9UBC3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.45■■□□□ 1.02
DNMT3BQ9UBC3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.45■■□□□ 1.02
DNMT3BQ9UBC3 MIR4497-201ENST00000583208 89 ntBASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms