Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL20A1Q9P218 AC092368.3-202ENST00000574180 1591 ntBASIC23.33■■□□□ 1.33
COL20A1Q9P218 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
COL20A1Q9P218 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.33■■□□□ 1.33
COL20A1Q9P218 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL20A1Q9P218 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.33■■□□□ 1.33
COL20A1Q9P218 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.33■■□□□ 1.33
COL20A1Q9P218 C2orf69P4-201ENST00000565394 541 ntBASIC23.33■■□□□ 1.33
COL20A1Q9P218 LINC00565-201ENST00000562710 2331 ntBASIC23.33■■□□□ 1.33
COL20A1Q9P218 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL20A1Q9P218 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
COL20A1Q9P218 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
COL20A1Q9P218 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
COL20A1Q9P218 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
COL20A1Q9P218 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.33■■□□□ 1.32
COL20A1Q9P218 AL049796.1-201ENST00000565336 1766 ntBASIC23.32■■□□□ 1.32
COL20A1Q9P218 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL20A1Q9P218 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL20A1Q9P218 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
COL20A1Q9P218 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL20A1Q9P218 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
COL20A1Q9P218 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.32■■□□□ 1.32
COL20A1Q9P218 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.32■■□□□ 1.32
COL20A1Q9P218 RPS2P52-201ENST00000469610 820 ntBASIC23.32■■□□□ 1.32
COL20A1Q9P218 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.32■■□□□ 1.32
COL20A1Q9P218 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL20A1Q9P218 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL20A1Q9P218 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL20A1Q9P218 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL20A1Q9P218 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL20A1Q9P218 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
COL20A1Q9P218 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL20A1Q9P218 FEM1AP4-201ENST00000443167 1987 ntBASIC23.31■■□□□ 1.32
COL20A1Q9P218 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.31■■□□□ 1.32
COL20A1Q9P218 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL20A1Q9P218 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.31■■□□□ 1.32
COL20A1Q9P218 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
COL20A1Q9P218 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL20A1Q9P218 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.31■■□□□ 1.32
COL20A1Q9P218 AL356652.1-201ENST00000615962 565 ntBASIC23.31■■□□□ 1.32
COL20A1Q9P218 AC073648.6-201ENST00000641589 218 ntBASIC23.31■■□□□ 1.32
COL20A1Q9P218 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.31■■□□□ 1.32
COL20A1Q9P218 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL20A1Q9P218 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL20A1Q9P218 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.3■■□□□ 1.32
COL20A1Q9P218 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL20A1Q9P218 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL20A1Q9P218 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL20A1Q9P218 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
COL20A1Q9P218 AF106564.1-201ENST00000607058 2553 ntBASIC23.3■■□□□ 1.32
COL20A1Q9P218 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL20A1Q9P218 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
COL20A1Q9P218 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL20A1Q9P218 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL20A1Q9P218 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL20A1Q9P218 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL20A1Q9P218 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.3■■□□□ 1.32
COL20A1Q9P218 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.3■■□□□ 1.32
COL20A1Q9P218 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.3■■□□□ 1.32
COL20A1Q9P218 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
COL20A1Q9P218 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL20A1Q9P218 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL20A1Q9P218 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL20A1Q9P218 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL20A1Q9P218 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL20A1Q9P218 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
COL20A1Q9P218 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
COL20A1Q9P218 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.29■■□□□ 1.32
COL20A1Q9P218 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL20A1Q9P218 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL20A1Q9P218 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL20A1Q9P218 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.29■■□□□ 1.32
COL20A1Q9P218 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.29■■□□□ 1.32
COL20A1Q9P218 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL20A1Q9P218 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.29■■□□□ 1.32
COL20A1Q9P218 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL20A1Q9P218 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL20A1Q9P218 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL20A1Q9P218 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.29■■□□□ 1.32
COL20A1Q9P218 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.28■■□□□ 1.32
COL20A1Q9P218 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL20A1Q9P218 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL20A1Q9P218 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL20A1Q9P218 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL20A1Q9P218 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
COL20A1Q9P218 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL20A1Q9P218 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL20A1Q9P218 UNC93B4-201ENST00000505679 747 ntBASIC23.28■■□□□ 1.32
COL20A1Q9P218 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.28■■□□□ 1.32
COL20A1Q9P218 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL20A1Q9P218 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.28■■□□□ 1.32
COL20A1Q9P218 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.28■■□□□ 1.32
COL20A1Q9P218 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL20A1Q9P218 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL20A1Q9P218 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL20A1Q9P218 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.28■■□□□ 1.32
COL20A1Q9P218 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
COL20A1Q9P218 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL20A1Q9P218 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL20A1Q9P218 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms