Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SLC52A1Q9NWF4 PRKY-204ENST00000533551 1019 ntBASIC29.68■■■□□ 2.34
SLC52A1Q9NWF4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC29.68■■■□□ 2.34
SLC52A1Q9NWF4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC29.68■■■□□ 2.34
SLC52A1Q9NWF4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
SLC52A1Q9NWF4 AC133561.5-201ENST00000635547 218 ntBASIC29.68■■■□□ 2.34
SLC52A1Q9NWF4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
SLC52A1Q9NWF4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC29.68■■■□□ 2.34
SLC52A1Q9NWF4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SLC52A1Q9NWF4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SLC52A1Q9NWF4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC29.67■■■□□ 2.34
SLC52A1Q9NWF4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SLC52A1Q9NWF4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SLC52A1Q9NWF4 AL390719.1-204ENST00000412397 1219 ntBASIC29.67■■■□□ 2.34
SLC52A1Q9NWF4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC29.67■■■□□ 2.34
SLC52A1Q9NWF4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC29.67■■■□□ 2.34
SLC52A1Q9NWF4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
SLC52A1Q9NWF4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC29.67■■■□□ 2.34
SLC52A1Q9NWF4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC29.66■■■□□ 2.34
SLC52A1Q9NWF4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC29.66■■■□□ 2.34
SLC52A1Q9NWF4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SLC52A1Q9NWF4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SLC52A1Q9NWF4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SLC52A1Q9NWF4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC29.66■■■□□ 2.34
SLC52A1Q9NWF4 AL355075.4-201ENST00000554988 638 ntBASIC29.66■■■□□ 2.34
SLC52A1Q9NWF4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC29.66■■■□□ 2.34
SLC52A1Q9NWF4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SLC52A1Q9NWF4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
SLC52A1Q9NWF4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC29.66■■■□□ 2.34
SLC52A1Q9NWF4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 MAX-217ENST00000557277 728 ntTSL 3 BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SLC52A1Q9NWF4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
SLC52A1Q9NWF4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
SLC52A1Q9NWF4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SLC52A1Q9NWF4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SLC52A1Q9NWF4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SLC52A1Q9NWF4 PENK-204ENST00000518770 863 ntTSL 2 BASIC29.64■■■□□ 2.34
SLC52A1Q9NWF4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
SLC52A1Q9NWF4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC29.64■■■□□ 2.34
SLC52A1Q9NWF4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC29.64■■■□□ 2.34
SLC52A1Q9NWF4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC29.64■■■□□ 2.34
SLC52A1Q9NWF4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC29.64■■■□□ 2.34
SLC52A1Q9NWF4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC29.63■■■□□ 2.33
SLC52A1Q9NWF4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
SLC52A1Q9NWF4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SLC52A1Q9NWF4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
SLC52A1Q9NWF4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
SLC52A1Q9NWF4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC29.63■■■□□ 2.33
SLC52A1Q9NWF4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC29.63■■■□□ 2.33
SLC52A1Q9NWF4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC29.63■■■□□ 2.33
SLC52A1Q9NWF4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
SLC52A1Q9NWF4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
SLC52A1Q9NWF4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC29.63■■■□□ 2.33
SLC52A1Q9NWF4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC29.63■■■□□ 2.33
SLC52A1Q9NWF4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC29.62■■■□□ 2.33
SLC52A1Q9NWF4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SLC52A1Q9NWF4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC29.61■■■□□ 2.33
SLC52A1Q9NWF4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
SLC52A1Q9NWF4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
SLC52A1Q9NWF4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC29.61■■■□□ 2.33
SLC52A1Q9NWF4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC29.61■■■□□ 2.33
SLC52A1Q9NWF4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SLC52A1Q9NWF4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SLC52A1Q9NWF4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms