Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 UBE2DNL-204ENST00000602536 740 ntBASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POPDC3Q9HBV1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
POPDC3Q9HBV1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
POPDC3Q9HBV1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
POPDC3Q9HBV1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
POPDC3Q9HBV1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.17■□□□□ 0.82
POPDC3Q9HBV1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.17■□□□□ 0.82
POPDC3Q9HBV1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
POPDC3Q9HBV1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
POPDC3Q9HBV1 CDV3P1-201ENST00000471403 739 ntBASIC20.17■□□□□ 0.82
POPDC3Q9HBV1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.17■□□□□ 0.82
POPDC3Q9HBV1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
POPDC3Q9HBV1 MYCNOS-205ENST00000641950 531 ntBASIC20.17■□□□□ 0.82
POPDC3Q9HBV1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
POPDC3Q9HBV1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.17■□□□□ 0.82
POPDC3Q9HBV1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
POPDC3Q9HBV1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 FAM21FP-204ENST00000608637 956 ntBASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.16■□□□□ 0.82
POPDC3Q9HBV1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 AC097381.1-201ENST00000429019 1296 ntBASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 AC034268.1-201ENST00000441047 882 ntBASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 KRT8P36-201ENST00000489121 1440 ntBASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.15■□□□□ 0.82
POPDC3Q9HBV1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
POPDC3Q9HBV1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
POPDC3Q9HBV1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
POPDC3Q9HBV1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
POPDC3Q9HBV1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
POPDC3Q9HBV1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
POPDC3Q9HBV1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.14■□□□□ 0.81
POPDC3Q9HBV1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
POPDC3Q9HBV1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.14■□□□□ 0.81
POPDC3Q9HBV1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
POPDC3Q9HBV1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
POPDC3Q9HBV1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 1574.6 ms