Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CDCP1Q9H5V8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCP1Q9H5V8 LSM12P1-201ENST00000411836 588 ntBASIC19.1■□□□□ 0.65
CDCP1Q9H5V8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.1■□□□□ 0.65
CDCP1Q9H5V8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCP1Q9H5V8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CDCP1Q9H5V8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCP1Q9H5V8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCP1Q9H5V8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCP1Q9H5V8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.1■□□□□ 0.65
CDCP1Q9H5V8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCP1Q9H5V8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CDCP1Q9H5V8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 AC116050.2-201ENST00000612102 1779 ntBASIC19.09■□□□□ 0.65
CDCP1Q9H5V8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.08■□□□□ 0.65
CDCP1Q9H5V8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDCP1Q9H5V8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDCP1Q9H5V8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDCP1Q9H5V8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.65
CDCP1Q9H5V8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDCP1Q9H5V8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 AC097658.1-201ENST00000475555 843 ntBASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 AC100791.3-201ENST00000617619 330 ntBASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.08■□□□□ 0.64
CDCP1Q9H5V8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDCP1Q9H5V8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCP1Q9H5V8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDCP1Q9H5V8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCP1Q9H5V8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCP1Q9H5V8 KRT17P1-201ENST00000399211 1546 ntBASIC19.06■□□□□ 0.64
CDCP1Q9H5V8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCP1Q9H5V8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDCP1Q9H5V8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.06■□□□□ 0.64
CDCP1Q9H5V8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCP1Q9H5V8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCP1Q9H5V8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCP1Q9H5V8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDCP1Q9H5V8 MCRIP2P1-201ENST00000394346 511 ntBASIC19.06■□□□□ 0.64
CDCP1Q9H5V8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms