Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 AC006128.1-201ENST00000624704 1661 ntBASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 AC093484.2-201ENST00000580996 2166 ntBASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 LBX2-AS1-202ENST00000603175 2083 ntBASIC12□□□□□ -0.49
CYSTM1Q9H1C7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CYSTM1Q9H1C7 TCF3P1-201ENST00000423021 1937 ntBASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 AC026471.6-201ENST00000622954 1905 ntBASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 LINC00554-201ENST00000564841 3011 ntBASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms