Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 MMP17-211ENST00000545790 552 ntTSL 227.06■■□□□ 1.929e-9■■■■□ 24.5
XRN2Q9H0D6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.099e-9■■■■□ 24.5
XRN2Q9H0D6 CARS-204ENST00000439280 1021 ntTSL 321.46■■□□□ 1.031e-8■■■■□ 24.5
XRN2Q9H0D6 CARS-207ENST00000465331 583 ntTSL 316.62■□□□□ 0.251e-8■■■■□ 24.5
XRN2Q9H0D6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.13■□□□□ 0.171e-8■■■■□ 24.5
XRN2Q9H0D6 CARS-213ENST00000527330 564 ntTSL 415.54■□□□□ 0.081e-8■■■■□ 24.5
XRN2Q9H0D6 CARS-211ENST00000524825 550 ntTSL 415.54■□□□□ 0.081e-8■■■■□ 24.5
XRN2Q9H0D6 CARS-216ENST00000639317 135 ntTSL 5 BASIC14.54□□□□□ -0.081e-8■■■■□ 24.5
XRN2Q9H0D6 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.85□□□□□ -0.191e-8■■■■□ 24.5
XRN2Q9H0D6 CARS-202ENST00000380525 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.41e-8■■■■□ 24.5
XRN2Q9H0D6 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC12.03□□□□□ -0.481e-8■■■■□ 24.5
XRN2Q9H0D6 CARS-212ENST00000526890 5732 ntTSL 211.47□□□□□ -0.571e-8■■■■□ 24.5
XRN2Q9H0D6 CARS-215ENST00000531387 2805 ntTSL 210.55□□□□□ -0.721e-8■■■■□ 24.5
XRN2Q9H0D6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC27.41■■□□□ 1.982e-6■■■■□ 24.5
XRN2Q9H0D6 PCGF3-210ENST00000482726 538 ntTSL 425.41■■□□□ 1.662e-6■■■■□ 24.5
XRN2Q9H0D6 ARL16-208ENST00000573569 786 ntTSL 233.15■■■□□ 2.94e-6■■■■□ 24.5
XRN2Q9H0D6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC24.6■■□□□ 1.534e-6■■■■□ 24.5
XRN2Q9H0D6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC24.6■■□□□ 1.534e-6■■■■□ 24.5
XRN2Q9H0D6 ARL16-204ENST00000571082 1526 ntTSL 223.21■■□□□ 1.314e-6■■■■□ 24.5
XRN2Q9H0D6 ARL16-203ENST00000570910 1856 ntTSL 520.17■□□□□ 0.824e-6■■■■□ 24.5
XRN2Q9H0D6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.91■□□□□ 0.624e-6■■■■□ 24.5
XRN2Q9H0D6 RPH3AL-219ENST00000576001 647 ntTSL 318.25■□□□□ 0.513e-6■■■■□ 24.5
XRN2Q9H0D6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.15■□□□□ 0.54e-6■■■■□ 24.5
XRN2Q9H0D6 ARL16-213ENST00000577142 2343 ntTSL 218.06■□□□□ 0.484e-6■■■■□ 24.5
XRN2Q9H0D6 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.52■□□□□ 0.44e-6■■■■□ 24.5
XRN2Q9H0D6 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.52■□□□□ 0.44e-6■■■■□ 24.5
XRN2Q9H0D6 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.264e-6■■■■□ 24.5
XRN2Q9H0D6 ARL16-207ENST00000573392 869 ntTSL 3 BASIC13.15□□□□□ -0.34e-6■■■■□ 24.5
XRN2Q9H0D6 AKAP1-215ENST00000575186 578 ntTSL 426.24■■□□□ 1.791e-6■■■■□ 24.5
XRN2Q9H0D6 AKAP1-205ENST00000570423 568 ntTSL 422.65■■□□□ 1.221e-6■■■■□ 24.5
XRN2Q9H0D6 AKAP1-211ENST00000573085 484 ntTSL 420.2■□□□□ 0.821e-6■■■■□ 24.5
XRN2Q9H0D6 YWHAZ-221ENST00000523131 567 ntTSL 525.65■■□□□ 1.74e-7■■■■□ 24.5
XRN2Q9H0D6 YWHAZ-208ENST00000418997 996 ntTSL 225.41■■□□□ 1.664e-7■■■■□ 24.5
XRN2Q9H0D6 YWHAZ-223ENST00000523938 626 ntTSL 523.45■■□□□ 1.344e-7■■■■□ 24.5
XRN2Q9H0D6 YWHAZ-210ENST00000437293 701 ntTSL 322.74■■□□□ 1.234e-7■■■■□ 24.5
XRN2Q9H0D6 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.334e-7■■■■□ 24.5
XRN2Q9H0D6 YWHAZ-202ENST00000395948 812 ntTSL 3 BASIC10.03□□□□□ -0.84e-7■■■■□ 24.5
XRN2Q9H0D6 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.754e-7■■■■□ 24.5
XRN2Q9H0D6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.764e-7■■■■□ 24.5
XRN2Q9H0D6 RIPOR1-202ENST00000379312 4116 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.343e-6■■■■□ 24.5
XRN2Q9H0D6 RIPOR1-205ENST00000540839 4260 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.453e-6■■■■□ 24.5
XRN2Q9H0D6 RIPOR1-201ENST00000042381 4051 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.553e-6■■■■□ 24.5
XRN2Q9H0D6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC28.28■■■□□ 2.123e-6■■■■□ 24.4
XRN2Q9H0D6 FKBP1B-204ENST00000438630 1137 ntTSL 1 (best)19.42■□□□□ 0.73e-6■■■■□ 24.4
XRN2Q9H0D6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.293e-6■■■■□ 24.4
XRN2Q9H0D6 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC16.14■□□□□ 0.173e-6■■■■□ 24.4
XRN2Q9H0D6 FKBP1B-206ENST00000496149 1601 ntTSL 515.76■□□□□ 0.113e-6■■■■□ 24.4
XRN2Q9H0D6 MFSD2B-203ENST00000453731 674 ntTSL 312.08□□□□□ -0.483e-6■■■■□ 24.4
XRN2Q9H0D6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.79■■□□□ 1.562e-6■■■■□ 24.4
XRN2Q9H0D6 BDH1-205ENST00000432819 955 ntTSL 524.24■■□□□ 1.472e-6■■■■□ 24.4
XRN2Q9H0D6 BDH1-209ENST00000446746 868 ntTSL 324.24■■□□□ 1.472e-6■■■■□ 24.4
XRN2Q9H0D6 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.292e-6■■■■□ 24.4
XRN2Q9H0D6 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.342e-6■■■■□ 24.4
XRN2Q9H0D6 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.522e-6■■■■□ 24.4
XRN2Q9H0D6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.33■□□□□ 0.363e-6■■■■□ 24.4
XRN2Q9H0D6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.45■□□□□ 0.063e-6■■■■□ 24.4
XRN2Q9H0D6 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.483e-6■■■■□ 24.4
XRN2Q9H0D6 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.19□□□□□ -1.13e-6■■■■□ 24.4
XRN2Q9H0D6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC34.18■■■■□ 3.067e-15■■■■□ 24.3
XRN2Q9H0D6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC33.65■■■□□ 2.987e-15■■■■□ 24.3
XRN2Q9H0D6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.84■■□□□ 1.257e-15■■■■□ 24.3
XRN2Q9H0D6 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.013e-6■■■■□ 24.3
XRN2Q9H0D6 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.283e-6■■■■□ 24.3
XRN2Q9H0D6 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.283e-6■■■■□ 24.3
XRN2Q9H0D6 HDAC7-230ENST00000552960 3216 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.453e-6■■■■□ 24.3
XRN2Q9H0D6 PRR7-AS1-201ENST00000425316 741 ntTSL 3 BASIC12.65□□□□□ -0.388e-7■■■■□ 24.3
XRN2Q9H0D6 DLEU1-210ENST00000469095 1736 ntTSL 513.75□□□□□ -0.212e-14■■■■□ 24.3
XRN2Q9H0D6 DLEU1-219ENST00000476738 838 ntTSL 5 BASIC13.35□□□□□ -0.272e-14■■■■□ 24.3
XRN2Q9H0D6 DLEU1-213ENST00000470593 668 ntTSL 1 (best)13.35□□□□□ -0.272e-14■■■■□ 24.3
XRN2Q9H0D6 DLEU1-208ENST00000468168 982 ntTSL 1 (best) BASIC13.32□□□□□ -0.282e-14■■■■□ 24.3
XRN2Q9H0D6 DLEU1-217ENST00000474630 518 ntTSL 513.15□□□□□ -0.32e-14■■■■□ 24.3
XRN2Q9H0D6 DLEU1-204ENST00000462427 1119 ntTSL 1 (best)12.99□□□□□ -0.332e-14■■■■□ 24.3
XRN2Q9H0D6 DLEU1-232ENST00000491341 1141 ntTSL 5 BASIC12.9□□□□□ -0.342e-14■■■■□ 24.3
XRN2Q9H0D6 DLEU1-233ENST00000491482 431 ntTSL 1 (best)12.69□□□□□ -0.382e-14■■■■□ 24.3
XRN2Q9H0D6 DLEU1-207ENST00000467721 1455 ntTSL 5 BASIC12.38□□□□□ -0.432e-14■■■■□ 24.3
XRN2Q9H0D6 DLEU1-209ENST00000468522 1158 ntTSL 5 BASIC12.15□□□□□ -0.462e-14■■■■□ 24.3
XRN2Q9H0D6 DLEU1-231ENST00000490577 2440 ntTSL 5 BASIC11.54□□□□□ -0.562e-14■■■■□ 24.3
XRN2Q9H0D6 DLEU1-206ENST00000463474 1048 ntTSL 1 (best) BASIC11.28□□□□□ -0.62e-14■■■■□ 24.3
XRN2Q9H0D6 DLEU1-227ENST00000484869 1652 ntTSL 510.53□□□□□ -0.722e-14■■■■□ 24.3
XRN2Q9H0D6 DLEU1-234ENST00000491615 1451 ntTSL 5 BASIC10.23□□□□□ -0.772e-14■■■■□ 24.3
XRN2Q9H0D6 DLEU1-228ENST00000485007 736 ntTSL 510.17□□□□□ -0.782e-14■■■■□ 24.3
XRN2Q9H0D6 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.341e-6■■■■□ 24.3
XRN2Q9H0D6 DLEU1-202ENST00000460525 1031 ntTSL 1 (best)4.82□□□□□ -1.642e-14■■■■□ 24.3
XRN2Q9H0D6 ZFAND6-218ENST00000561012 585 ntTSL 326.44■■□□□ 1.822e-7■■■■□ 24.3
XRN2Q9H0D6 ZFAND6-221ENST00000564367 582 ntTSL 320.93■□□□□ 0.942e-7■■■■□ 24.3
XRN2Q9H0D6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.762e-7■■■■□ 24.3
XRN2Q9H0D6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.57■□□□□ 0.42e-7■■■■□ 24.3
XRN2Q9H0D6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.242e-7■■■■□ 24.3
XRN2Q9H0D6 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.022e-7■■■■□ 24.3
XRN2Q9H0D6 ZFAND6-220ENST00000561060 891 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.292e-7■■■■□ 24.3
XRN2Q9H0D6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.76■□□□□ 0.919e-7■■■■□ 24.3
XRN2Q9H0D6 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.69■□□□□ 0.749e-7■■■■□ 24.3
XRN2Q9H0D6 MED16-209ENST00000592943 1628 ntTSL 1 (best)19.47■□□□□ 0.719e-7■■■■□ 24.3
XRN2Q9H0D6 MED16-205ENST00000586017 1403 ntTSL 1 (best)17.31■□□□□ 0.369e-7■■■■□ 24.3
XRN2Q9H0D6 MED16-211ENST00000606828 599 ntTSL 1 (best)16.16■□□□□ 0.189e-7■■■■□ 24.3
XRN2Q9H0D6 MED16-212ENST00000607471 2004 ntTSL 1 (best)15.64■□□□□ 0.099e-7■■■■□ 24.3
XRN2Q9H0D6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.069e-7■■■■□ 24.3
XRN2Q9H0D6 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.07■□□□□ 0.164e-7■■■■□ 24.3
XRN2Q9H0D6 LRRC8D-206ENST00000527156 922 ntTSL 214.05□□□□□ -0.166e-9■■■■□ 24.3
XRN2Q9H0D6 TES-204ENST00000455989 577 ntTSL 325.72■■□□□ 1.714e-11■■■■□ 24.3
Retrieved 100 of 21,068 protein–RNA pairs in 192.3 ms