Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 AP004607.4-201ENST00000530158 1459 ntBASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
KRTAP3-1Q9BYR8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC10.4□□□□□ -0.75
KRTAP3-1Q9BYR8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
KRTAP3-1Q9BYR8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
KRTAP3-1Q9BYR8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
KRTAP3-1Q9BYR8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
KRTAP3-1Q9BYR8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
KRTAP3-1Q9BYR8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
KRTAP3-1Q9BYR8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC10.4□□□□□ -0.75
KRTAP3-1Q9BYR8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 AC126544.1-201ENST00000580842 1059 ntBASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 AC105233.4-201ENST00000642045 216 ntBASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 RN7SL832P-201ENST00000607781 1756 ntBASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 BX323043.1-201ENST00000641006 1765 ntBASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
KRTAP3-1Q9BYR8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
KRTAP3-1Q9BYR8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 UNC93B3-201ENST00000308076 687 ntBASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms