Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.1■□□□□ 0.33
SSBP3Q9BWW4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSBP3Q9BWW4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSBP3Q9BWW4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSBP3Q9BWW4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSBP3Q9BWW4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSBP3Q9BWW4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSBP3Q9BWW4 MCRIP2P1-201ENST00000394346 511 ntBASIC17.1■□□□□ 0.33
SSBP3Q9BWW4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.1■□□□□ 0.33
SSBP3Q9BWW4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
SSBP3Q9BWW4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.1■□□□□ 0.33
SSBP3Q9BWW4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.1■□□□□ 0.33
SSBP3Q9BWW4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSBP3Q9BWW4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSBP3Q9BWW4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSBP3Q9BWW4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.1■□□□□ 0.33
SSBP3Q9BWW4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.1■□□□□ 0.33
SSBP3Q9BWW4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 SLC25A24-204ENST00000569674 2357 ntBASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 CD99P1-205ENST00000527459 561 ntBASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSBP3Q9BWW4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSBP3Q9BWW4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SSBP3Q9BWW4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSBP3Q9BWW4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSBP3Q9BWW4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SSBP3Q9BWW4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SSBP3Q9BWW4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.08■□□□□ 0.32
SSBP3Q9BWW4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.08■□□□□ 0.32
SSBP3Q9BWW4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.08■□□□□ 0.32
SSBP3Q9BWW4 KRT18P6-201ENST00000555540 1265 ntBASIC17.08■□□□□ 0.32
SSBP3Q9BWW4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.08■□□□□ 0.32
SSBP3Q9BWW4 CYP2T3P-201ENST00000601990 817 ntBASIC17.08■□□□□ 0.32
SSBP3Q9BWW4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SSBP3Q9BWW4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.08■□□□□ 0.32
SSBP3Q9BWW4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.08■□□□□ 0.32
SSBP3Q9BWW4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSBP3Q9BWW4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SSBP3Q9BWW4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 AC097658.1-201ENST00000475555 843 ntBASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.07■□□□□ 0.32
SSBP3Q9BWW4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 AL355472.2-201ENST00000422958 438 ntBASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms