Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.74■□□□□ 0.91
LRFN3Q9BTN0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRFN3Q9BTN0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.74■□□□□ 0.91
LRFN3Q9BTN0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRFN3Q9BTN0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRFN3Q9BTN0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LRFN3Q9BTN0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.74■□□□□ 0.91
LRFN3Q9BTN0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRFN3Q9BTN0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRFN3Q9BTN0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
LRFN3Q9BTN0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.74■□□□□ 0.91
LRFN3Q9BTN0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.74■□□□□ 0.91
LRFN3Q9BTN0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRFN3Q9BTN0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRFN3Q9BTN0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 LINC01960-201ENST00000563759 1884 ntBASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 RNF152P1-201ENST00000397754 604 ntBASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 AC012313.10-201ENST00000623509 926 ntBASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 AL121956.5-201ENST00000625261 221 ntBASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 NBPF21P-201ENST00000425093 1451 ntBASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
LRFN3Q9BTN0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 C2orf69P3-201ENST00000565542 1120 ntBASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRFN3Q9BTN0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRFN3Q9BTN0 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.71■□□□□ 0.91
LRFN3Q9BTN0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.71■□□□□ 0.91
LRFN3Q9BTN0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.71■□□□□ 0.91
LRFN3Q9BTN0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.71■□□□□ 0.91
LRFN3Q9BTN0 FAM207BP-201ENST00000447172 505 ntBASIC20.71■□□□□ 0.91
LRFN3Q9BTN0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.71■□□□□ 0.91
LRFN3Q9BTN0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.71■□□□□ 0.91
LRFN3Q9BTN0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LRFN3Q9BTN0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.71■□□□□ 0.91
LRFN3Q9BTN0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRFN3Q9BTN0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRFN3Q9BTN0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.71■□□□□ 0.91
LRFN3Q9BTN0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRFN3Q9BTN0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRFN3Q9BTN0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRFN3Q9BTN0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRFN3Q9BTN0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRFN3Q9BTN0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
LRFN3Q9BTN0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRFN3Q9BTN0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRFN3Q9BTN0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRFN3Q9BTN0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRFN3Q9BTN0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.7■□□□□ 0.9
LRFN3Q9BTN0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRFN3Q9BTN0 EGLN1P1-201ENST00000531623 762 ntBASIC20.7■□□□□ 0.9
LRFN3Q9BTN0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.7■□□□□ 0.9
LRFN3Q9BTN0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.7■□□□□ 0.9
LRFN3Q9BTN0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.7■□□□□ 0.9
LRFN3Q9BTN0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRFN3Q9BTN0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.69■□□□□ 0.9
LRFN3Q9BTN0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LRFN3Q9BTN0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRFN3Q9BTN0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms