Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 AC099778.1-201ENST00000568593 1911 ntBASIC17.58■□□□□ 0.4
NICN1Q9BSH3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NICN1Q9BSH3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.58■□□□□ 0.4
NICN1Q9BSH3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NICN1Q9BSH3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NICN1Q9BSH3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.58■□□□□ 0.4
NICN1Q9BSH3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.58■□□□□ 0.4
NICN1Q9BSH3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NICN1Q9BSH3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.57■□□□□ 0.4
NICN1Q9BSH3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NICN1Q9BSH3 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.57■□□□□ 0.4
NICN1Q9BSH3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.57■□□□□ 0.4
NICN1Q9BSH3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NICN1Q9BSH3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NICN1Q9BSH3 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.57■□□□□ 0.4
NICN1Q9BSH3 AC061975.6-201ENST00000579045 1553 ntBASIC17.57■□□□□ 0.4
NICN1Q9BSH3 AC011484.1-201ENST00000377652 1995 ntBASIC17.57■□□□□ 0.4
NICN1Q9BSH3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NICN1Q9BSH3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NICN1Q9BSH3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NICN1Q9BSH3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NICN1Q9BSH3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 AC138932.1-201ENST00000534164 6830 ntBASIC17.54■□□□□ 0.4
NICN1Q9BSH3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 EEF1DP3-203ENST00000566025 782 ntBASIC17.54■□□□□ 0.4
NICN1Q9BSH3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.54■□□□□ 0.4
NICN1Q9BSH3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.53■□□□□ 0.4
NICN1Q9BSH3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NICN1Q9BSH3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NICN1Q9BSH3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NICN1Q9BSH3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NICN1Q9BSH3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
NICN1Q9BSH3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms