Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 OR7E47P-201ENST00000546390 1422 ntBASIC19.31■□□□□ 0.68
NR1H4Q96RI1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H4Q96RI1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H4Q96RI1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
NR1H4Q96RI1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H4Q96RI1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.3■□□□□ 0.68
NR1H4Q96RI1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NR1H4Q96RI1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H4Q96RI1 TSPY13P-201ENST00000338964 914 ntBASIC19.3■□□□□ 0.68
NR1H4Q96RI1 PVT1_1.1-201ENST00000615125 194 ntBASIC19.3■□□□□ 0.68
NR1H4Q96RI1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NR1H4Q96RI1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H4Q96RI1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.3■□□□□ 0.68
NR1H4Q96RI1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H4Q96RI1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H4Q96RI1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H4Q96RI1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H4Q96RI1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H4Q96RI1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR1H4Q96RI1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR1H4Q96RI1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
NR1H4Q96RI1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NR1H4Q96RI1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
NR1H4Q96RI1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NR1H4Q96RI1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.29■□□□□ 0.68
NR1H4Q96RI1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.29■□□□□ 0.68
NR1H4Q96RI1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR1H4Q96RI1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NR1H4Q96RI1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
NR1H4Q96RI1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.29■□□□□ 0.68
NR1H4Q96RI1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 THA1P-201ENST00000590384 1145 ntBASIC19.28■□□□□ 0.68
NR1H4Q96RI1 AC074183.2-201ENST00000623112 922 ntBASIC19.28■□□□□ 0.68
NR1H4Q96RI1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H4Q96RI1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR1H4Q96RI1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR1H4Q96RI1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NR1H4Q96RI1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.27■□□□□ 0.68
NR1H4Q96RI1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
NR1H4Q96RI1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR1H4Q96RI1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR1H4Q96RI1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR1H4Q96RI1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR1H4Q96RI1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR1H4Q96RI1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.27■□□□□ 0.68
NR1H4Q96RI1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.27■□□□□ 0.68
NR1H4Q96RI1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
NR1H4Q96RI1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
NR1H4Q96RI1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR1H4Q96RI1 AL049812.1-201ENST00000432563 2267 ntBASIC19.27■□□□□ 0.68
NR1H4Q96RI1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
NR1H4Q96RI1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.27■□□□□ 0.67
NR1H4Q96RI1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.27■□□□□ 0.67
NR1H4Q96RI1 AF131216.4-201ENST00000638924 1588 ntBASIC19.27■□□□□ 0.67
NR1H4Q96RI1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NR1H4Q96RI1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.27■□□□□ 0.67
NR1H4Q96RI1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NR1H4Q96RI1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR1H4Q96RI1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR1H4Q96RI1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.26■□□□□ 0.67
NR1H4Q96RI1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.26■□□□□ 0.67
NR1H4Q96RI1 AC007613.1-201ENST00000572811 2597 ntBASIC19.26■□□□□ 0.67
NR1H4Q96RI1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR1H4Q96RI1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.26■□□□□ 0.67
NR1H4Q96RI1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.26■□□□□ 0.67
NR1H4Q96RI1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.26■□□□□ 0.67
NR1H4Q96RI1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.26■□□□□ 0.67
NR1H4Q96RI1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NR1H4Q96RI1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NR1H4Q96RI1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR1H4Q96RI1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR1H4Q96RI1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
NR1H4Q96RI1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms