Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 AC116050.2-201ENST00000612102 1779 ntBASIC20.17■□□□□ 0.82
PCDH15Q96QU1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH15Q96QU1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH15Q96QU1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH15Q96QU1 KRASP1-201ENST00000407852 552 ntBASIC20.16■□□□□ 0.82
PCDH15Q96QU1 TSPY15P-201ENST00000457163 923 ntBASIC20.16■□□□□ 0.82
PCDH15Q96QU1 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH15Q96QU1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.16■□□□□ 0.82
PCDH15Q96QU1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH15Q96QU1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH15Q96QU1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH15Q96QU1 AC233723.2-201ENST00000623798 2106 ntBASIC20.16■□□□□ 0.82
PCDH15Q96QU1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PCDH15Q96QU1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH15Q96QU1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH15Q96QU1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH15Q96QU1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDH15Q96QU1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH15Q96QU1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH15Q96QU1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 AC133561.5-201ENST00000635547 218 ntBASIC20.15■□□□□ 0.82
PCDH15Q96QU1 AC097493.4-201ENST00000641197 219 ntBASIC20.15■□□□□ 0.82
PCDH15Q96QU1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH15Q96QU1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCDH15Q96QU1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH15Q96QU1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH15Q96QU1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDH15Q96QU1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDH15Q96QU1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
PCDH15Q96QU1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDH15Q96QU1 RARRES2P10-201ENST00000564312 460 ntBASIC20.14■□□□□ 0.81
PCDH15Q96QU1 AC110285.5-201ENST00000611501 352 ntBASIC20.14■□□□□ 0.81
PCDH15Q96QU1 AL135905.2-201ENST00000584934 1404 ntBASIC20.14■□□□□ 0.81
PCDH15Q96QU1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH15Q96QU1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH15Q96QU1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDH15Q96QU1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH15Q96QU1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDH15Q96QU1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH15Q96QU1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
PCDH15Q96QU1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDH15Q96QU1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDH15Q96QU1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH15Q96QU1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH15Q96QU1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH15Q96QU1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH15Q96QU1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH15Q96QU1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH15Q96QU1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH15Q96QU1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH15Q96QU1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCDH15Q96QU1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH15Q96QU1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH15Q96QU1 AC005829.2-201ENST00000571422 1056 ntBASIC20.13■□□□□ 0.81
PCDH15Q96QU1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH15Q96QU1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH15Q96QU1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH15Q96QU1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH15Q96QU1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PCDH15Q96QU1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH15Q96QU1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
PCDH15Q96QU1 C2orf69P4-201ENST00000565394 541 ntBASIC20.12■□□□□ 0.81
PCDH15Q96QU1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH15Q96QU1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.12■□□□□ 0.81
PCDH15Q96QU1 AL356652.1-201ENST00000615962 565 ntBASIC20.12■□□□□ 0.81
PCDH15Q96QU1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH15Q96QU1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
PCDH15Q96QU1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDH15Q96QU1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
PCDH15Q96QU1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH15Q96QU1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH15Q96QU1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
PCDH15Q96QU1 RN7SL850P-201ENST00000579959 291 ntBASIC20.12■□□□□ 0.81
PCDH15Q96QU1 AC120498.8-201ENST00000614275 531 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms