Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.16■□□□□ 0.98
RPRD1AQ96P16 AC142086.2-201ENST00000569753 217 ntBASIC21.16■□□□□ 0.98
RPRD1AQ96P16 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.16■□□□□ 0.98
RPRD1AQ96P16 CYP2T3P-201ENST00000601990 817 ntBASIC21.16■□□□□ 0.98
RPRD1AQ96P16 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RPRD1AQ96P16 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPRD1AQ96P16 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RPRD1AQ96P16 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.15■□□□□ 0.98
RPRD1AQ96P16 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RPRD1AQ96P16 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
RPRD1AQ96P16 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
RPRD1AQ96P16 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPRD1AQ96P16 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
RPRD1AQ96P16 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPRD1AQ96P16 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RPRD1AQ96P16 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.14■□□□□ 0.97
RPRD1AQ96P16 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.14■□□□□ 0.97
RPRD1AQ96P16 MIR4758-201ENST00000577688 71 ntBASIC21.14■□□□□ 0.97
RPRD1AQ96P16 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
RPRD1AQ96P16 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RPRD1AQ96P16 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.14■□□□□ 0.97
RPRD1AQ96P16 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RPRD1AQ96P16 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPRD1AQ96P16 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPRD1AQ96P16 PLK5-205ENST00000642079 1969 ntBASIC21.14■□□□□ 0.97
RPRD1AQ96P16 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RPRD1AQ96P16 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPRD1AQ96P16 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPRD1AQ96P16 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RPRD1AQ96P16 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RPRD1AQ96P16 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPRD1AQ96P16 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPRD1AQ96P16 LSM12P1-201ENST00000411836 588 ntBASIC21.13■□□□□ 0.97
RPRD1AQ96P16 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.13■□□□□ 0.97
RPRD1AQ96P16 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
RPRD1AQ96P16 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.13■□□□□ 0.97
RPRD1AQ96P16 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPRD1AQ96P16 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPRD1AQ96P16 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPRD1AQ96P16 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPRD1AQ96P16 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPRD1AQ96P16 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPRD1AQ96P16 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RPRD1AQ96P16 AL137060.1-201ENST00000618151 2648 ntBASIC21.12■□□□□ 0.97
RPRD1AQ96P16 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 KRT18P68-201ENST00000392293 1000 ntBASIC21.12■□□□□ 0.97
RPRD1AQ96P16 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 AC098934.4-201ENST00000564127 592 ntBASIC21.12■□□□□ 0.97
RPRD1AQ96P16 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 AC092118.2-201ENST00000613495 667 ntBASIC21.12■□□□□ 0.97
RPRD1AQ96P16 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 KRT17P1-201ENST00000399211 1546 ntBASIC21.12■□□□□ 0.97
RPRD1AQ96P16 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPRD1AQ96P16 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPRD1AQ96P16 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
RPRD1AQ96P16 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.11■□□□□ 0.97
RPRD1AQ96P16 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPRD1AQ96P16 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPRD1AQ96P16 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPRD1AQ96P16 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPRD1AQ96P16 AC069152.1-201ENST00000438030 544 ntBASIC21.11■□□□□ 0.97
RPRD1AQ96P16 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.11■□□□□ 0.97
RPRD1AQ96P16 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPRD1AQ96P16 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.11■□□□□ 0.97
RPRD1AQ96P16 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPRD1AQ96P16 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPRD1AQ96P16 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms