Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.36■□□□□ 0.53
FOXN4Q96NZ1 AC004854.2-201ENST00000608450 1441 ntBASIC18.36■□□□□ 0.53
FOXN4Q96NZ1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.36■□□□□ 0.53
FOXN4Q96NZ1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.36■□□□□ 0.53
FOXN4Q96NZ1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN4Q96NZ1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN4Q96NZ1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 POU5F1P4-201ENST00000413175 1085 ntBASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 AC010141.2-201ENST00000452426 721 ntBASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 AP001160.3-201ENST00000601484 763 ntBASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN4Q96NZ1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 AC007225.1-201ENST00000566331 1836 ntBASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 AC027702.1-201ENST00000563810 1770 ntBASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
FOXN4Q96NZ1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXN4Q96NZ1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.33■□□□□ 0.53
FOXN4Q96NZ1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
FOXN4Q96NZ1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
FOXN4Q96NZ1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN4Q96NZ1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms