Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.08■□□□□ 0.8
PDLIM5Q96HC4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDLIM5Q96HC4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDLIM5Q96HC4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.08■□□□□ 0.8
PDLIM5Q96HC4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.08■□□□□ 0.8
PDLIM5Q96HC4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.08■□□□□ 0.8
PDLIM5Q96HC4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.07■□□□□ 0.8
PDLIM5Q96HC4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM5Q96HC4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM5Q96HC4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
PDLIM5Q96HC4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
PDLIM5Q96HC4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM5Q96HC4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.07■□□□□ 0.8
PDLIM5Q96HC4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM5Q96HC4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.07■□□□□ 0.8
PDLIM5Q96HC4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PDLIM5Q96HC4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM5Q96HC4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.07■□□□□ 0.8
PDLIM5Q96HC4 AL591742.1-201ENST00000604433 565 ntBASIC20.07■□□□□ 0.8
PDLIM5Q96HC4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM5Q96HC4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
PDLIM5Q96HC4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM5Q96HC4 AC092720.2-201ENST00000602388 1665 ntBASIC20.07■□□□□ 0.8
PDLIM5Q96HC4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 AC137761.2-201ENST00000561729 223 ntBASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 AC145350.3-201ENST00000569033 163 ntBASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 FAM21FP-204ENST00000608637 956 ntBASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.06■□□□□ 0.8
PDLIM5Q96HC4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.05■□□□□ 0.8
PDLIM5Q96HC4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 KRT8P36-201ENST00000489121 1440 ntBASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 AC006015.1-201ENST00000429970 570 ntBASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 AC013268.1-206ENST00000638368 961 ntBASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 AC112229.1-201ENST00000639295 961 ntBASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM5Q96HC4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms