Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTP4Q96DX8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTP4Q96DX8 AC004911.1-201ENST00000416316 871 ntBASIC20.97■□□□□ 0.95
RTP4Q96DX8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.97■□□□□ 0.95
RTP4Q96DX8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.97■□□□□ 0.95
RTP4Q96DX8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.97■□□□□ 0.95
RTP4Q96DX8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.97■□□□□ 0.95
RTP4Q96DX8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.97■□□□□ 0.95
RTP4Q96DX8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RTP4Q96DX8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTP4Q96DX8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTP4Q96DX8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTP4Q96DX8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTP4Q96DX8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTP4Q96DX8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTP4Q96DX8 AC092720.2-201ENST00000602388 1665 ntBASIC20.96■□□□□ 0.95
RTP4Q96DX8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTP4Q96DX8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.96■□□□□ 0.95
RTP4Q96DX8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RTP4Q96DX8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTP4Q96DX8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTP4Q96DX8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RTP4Q96DX8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTP4Q96DX8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.96■□□□□ 0.95
RTP4Q96DX8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTP4Q96DX8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.96■□□□□ 0.95
RTP4Q96DX8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.96■□□□□ 0.95
RTP4Q96DX8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.96■□□□□ 0.95
RTP4Q96DX8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.96■□□□□ 0.95
RTP4Q96DX8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RTP4Q96DX8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTP4Q96DX8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTP4Q96DX8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTP4Q96DX8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTP4Q96DX8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.95■□□□□ 0.94
RTP4Q96DX8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTP4Q96DX8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTP4Q96DX8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTP4Q96DX8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTP4Q96DX8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
RTP4Q96DX8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.95■□□□□ 0.94
RTP4Q96DX8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.95■□□□□ 0.94
RTP4Q96DX8 KRT19P1-201ENST00000405746 1186 ntBASIC20.95■□□□□ 0.94
RTP4Q96DX8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.95■□□□□ 0.94
RTP4Q96DX8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.95■□□□□ 0.94
RTP4Q96DX8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RTP4Q96DX8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTP4Q96DX8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTP4Q96DX8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.95■□□□□ 0.94
RTP4Q96DX8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTP4Q96DX8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTP4Q96DX8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.95■□□□□ 0.94
RTP4Q96DX8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.94■□□□□ 0.94
RTP4Q96DX8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTP4Q96DX8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RTP4Q96DX8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTP4Q96DX8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTP4Q96DX8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.94■□□□□ 0.94
RTP4Q96DX8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTP4Q96DX8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.94■□□□□ 0.94
RTP4Q96DX8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTP4Q96DX8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.94■□□□□ 0.94
RTP4Q96DX8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.94■□□□□ 0.94
RTP4Q96DX8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTP4Q96DX8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTP4Q96DX8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTP4Q96DX8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTP4Q96DX8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.93■□□□□ 0.94
RTP4Q96DX8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
RTP4Q96DX8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RTP4Q96DX8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTP4Q96DX8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.93■□□□□ 0.94
RTP4Q96DX8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTP4Q96DX8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTP4Q96DX8 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.93■□□□□ 0.94
RTP4Q96DX8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.93■□□□□ 0.94
RTP4Q96DX8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.93■□□□□ 0.94
RTP4Q96DX8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTP4Q96DX8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.93■□□□□ 0.94
RTP4Q96DX8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTP4Q96DX8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.93■□□□□ 0.94
RTP4Q96DX8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTP4Q96DX8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTP4Q96DX8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RTP4Q96DX8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTP4Q96DX8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTP4Q96DX8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
RTP4Q96DX8 AC099778.1-201ENST00000568593 1911 ntBASIC20.92■□□□□ 0.94
RTP4Q96DX8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
RTP4Q96DX8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTP4Q96DX8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTP4Q96DX8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
RTP4Q96DX8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.92■□□□□ 0.94
RTP4Q96DX8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.92■□□□□ 0.94
RTP4Q96DX8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.92■□□□□ 0.94
RTP4Q96DX8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTP4Q96DX8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTP4Q96DX8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RTP4Q96DX8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
RTP4Q96DX8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms