Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCLNQ969V3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCLNQ969V3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCLNQ969V3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NCLNQ969V3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.81■□□□□ 0.76
NCLNQ969V3 AC092667.1-201ENST00000434301 2586 ntBASIC19.81■□□□□ 0.76
NCLNQ969V3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCLNQ969V3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.81■□□□□ 0.76
NCLNQ969V3 KRT19P1-201ENST00000405746 1186 ntBASIC19.81■□□□□ 0.76
NCLNQ969V3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCLNQ969V3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NCLNQ969V3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.81■□□□□ 0.76
NCLNQ969V3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCLNQ969V3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCLNQ969V3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCLNQ969V3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCLNQ969V3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.81■□□□□ 0.76
NCLNQ969V3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCLNQ969V3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NCLNQ969V3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCLNQ969V3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NCLNQ969V3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
NCLNQ969V3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCLNQ969V3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NCLNQ969V3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NCLNQ969V3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NCLNQ969V3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCLNQ969V3 AC104187.1-201ENST00000607510 612 ntBASIC19.8■□□□□ 0.76
NCLNQ969V3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NCLNQ969V3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCLNQ969V3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.8■□□□□ 0.76
NCLNQ969V3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.8■□□□□ 0.76
NCLNQ969V3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.8■□□□□ 0.76
NCLNQ969V3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCLNQ969V3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.79■□□□□ 0.76
NCLNQ969V3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.79■□□□□ 0.76
NCLNQ969V3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCLNQ969V3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NCLNQ969V3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCLNQ969V3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NCLNQ969V3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NCLNQ969V3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
NCLNQ969V3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.79■□□□□ 0.76
NCLNQ969V3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NCLNQ969V3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NCLNQ969V3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCLNQ969V3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCLNQ969V3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NCLNQ969V3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.79■□□□□ 0.76
NCLNQ969V3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCLNQ969V3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCLNQ969V3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NCLNQ969V3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NCLNQ969V3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCLNQ969V3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCLNQ969V3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCLNQ969V3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.78■□□□□ 0.76
NCLNQ969V3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.78■□□□□ 0.76
NCLNQ969V3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.78■□□□□ 0.76
NCLNQ969V3 AC137761.2-201ENST00000561729 223 ntBASIC19.78■□□□□ 0.76
NCLNQ969V3 AC145350.3-201ENST00000569033 163 ntBASIC19.78■□□□□ 0.76
NCLNQ969V3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.78■□□□□ 0.76
NCLNQ969V3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCLNQ969V3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCLNQ969V3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCLNQ969V3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCLNQ969V3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCLNQ969V3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NCLNQ969V3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCLNQ969V3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCLNQ969V3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCLNQ969V3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCLNQ969V3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCLNQ969V3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
NCLNQ969V3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCLNQ969V3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCLNQ969V3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.77■□□□□ 0.76
NCLNQ969V3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.77■□□□□ 0.76
NCLNQ969V3 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.77■□□□□ 0.76
NCLNQ969V3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.77■□□□□ 0.76
NCLNQ969V3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCLNQ969V3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NCLNQ969V3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
NCLNQ969V3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NCLNQ969V3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.76■□□□□ 0.75
NCLNQ969V3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCLNQ969V3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCLNQ969V3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NCLNQ969V3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCLNQ969V3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCLNQ969V3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
NCLNQ969V3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCLNQ969V3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.76■□□□□ 0.75
NCLNQ969V3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.76■□□□□ 0.75
NCLNQ969V3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.76■□□□□ 0.75
NCLNQ969V3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.76■□□□□ 0.75
NCLNQ969V3 AL137784.2-201ENST00000607332 1000 ntBASIC19.76■□□□□ 0.75
NCLNQ969V3 AC092437.1-201ENST00000624794 1048 ntBASIC19.76■□□□□ 0.75
NCLNQ969V3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCLNQ969V3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms