Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ATP6V0A1Q93050 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ATP6V0A1Q93050 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP6V0A1Q93050 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ATP6V0A1Q93050 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP6V0A1Q93050 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.02■■□□□ 1.28
ATP6V0A1Q93050 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP6V0A1Q93050 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.02■■□□□ 1.28
ATP6V0A1Q93050 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP6V0A1Q93050 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP6V0A1Q93050 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 CYP21A1P-202ENST00000354927 1481 ntBASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 GCSHP5-201ENST00000443090 522 ntBASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 AC026366.1-201ENST00000488803 879 ntBASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 AL049796.1-201ENST00000565336 1766 ntBASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A1Q93050 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
ATP6V0A1Q93050 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
ATP6V0A1Q93050 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23■■□□□ 1.27
ATP6V0A1Q93050 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23■■□□□ 1.27
ATP6V0A1Q93050 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23■■□□□ 1.27
ATP6V0A1Q93050 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23■■□□□ 1.27
ATP6V0A1Q93050 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23■■□□□ 1.27
ATP6V0A1Q93050 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23■■□□□ 1.27
ATP6V0A1Q93050 AP003097.1-201ENST00000530657 1135 ntBASIC23■■□□□ 1.27
ATP6V0A1Q93050 AL589743.5-201ENST00000616611 1050 ntBASIC23■■□□□ 1.27
ATP6V0A1Q93050 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23■■□□□ 1.27
ATP6V0A1Q93050 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
ATP6V0A1Q93050 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23■■□□□ 1.27
ATP6V0A1Q93050 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
ATP6V0A1Q93050 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
ATP6V0A1Q93050 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23■■□□□ 1.27
ATP6V0A1Q93050 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23■■□□□ 1.27
ATP6V0A1Q93050 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 AC011484.1-201ENST00000377652 1995 ntBASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A1Q93050 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 KRT18P68-201ENST00000392293 1000 ntBASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 AL158047.1-201ENST00000445918 881 ntBASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 FEM1AP4-201ENST00000443167 1987 ntBASIC22.98■■□□□ 1.27
ATP6V0A1Q93050 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.97■■□□□ 1.27
ATP6V0A1Q93050 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATP6V0A1Q93050 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATP6V0A1Q93050 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATP6V0A1Q93050 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATP6V0A1Q93050 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms