Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
MBD3L1Q8WWY6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
MBD3L1Q8WWY6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.09■□□□□ 0.17
MBD3L1Q8WWY6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MBD3L1Q8WWY6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.09■□□□□ 0.17
MBD3L1Q8WWY6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MBD3L1Q8WWY6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MBD3L1Q8WWY6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
MBD3L1Q8WWY6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.17
MBD3L1Q8WWY6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
MBD3L1Q8WWY6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MBD3L1Q8WWY6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MBD3L1Q8WWY6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
MBD3L1Q8WWY6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.08■□□□□ 0.16
MBD3L1Q8WWY6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MBD3L1Q8WWY6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MBD3L1Q8WWY6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MBD3L1Q8WWY6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
MBD3L1Q8WWY6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.08■□□□□ 0.16
MBD3L1Q8WWY6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
MBD3L1Q8WWY6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
MBD3L1Q8WWY6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
MBD3L1Q8WWY6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MBD3L1Q8WWY6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MBD3L1Q8WWY6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.08■□□□□ 0.16
MBD3L1Q8WWY6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MBD3L1Q8WWY6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.08■□□□□ 0.16
MBD3L1Q8WWY6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MBD3L1Q8WWY6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MBD3L1Q8WWY6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MBD3L1Q8WWY6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MBD3L1Q8WWY6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MBD3L1Q8WWY6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.07■□□□□ 0.16
MBD3L1Q8WWY6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.07■□□□□ 0.16
MBD3L1Q8WWY6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MBD3L1Q8WWY6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.07■□□□□ 0.16
MBD3L1Q8WWY6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MBD3L1Q8WWY6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.07■□□□□ 0.16
MBD3L1Q8WWY6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.07■□□□□ 0.16
MBD3L1Q8WWY6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MBD3L1Q8WWY6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MBD3L1Q8WWY6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MBD3L1Q8WWY6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 BX005040.4-201ENST00000637145 1518 ntBASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 AC103724.3-201ENST00000564481 992 ntBASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MBD3L1Q8WWY6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 AC093503.3-201ENST00000624917 2352 ntBASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L1Q8WWY6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L1Q8WWY6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.04■□□□□ 0.16
MBD3L1Q8WWY6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
MBD3L1Q8WWY6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L1Q8WWY6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L1Q8WWY6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L1Q8WWY6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
MBD3L1Q8WWY6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L1Q8WWY6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L1Q8WWY6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms