Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
TRAF3IP1Q8TDR0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
TRAF3IP1Q8TDR0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAF3IP1Q8TDR0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAF3IP1Q8TDR0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
TRAF3IP1Q8TDR0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAF3IP1Q8TDR0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRAF3IP1Q8TDR0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.34■■□□□ 1.01
TRAF3IP1Q8TDR0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TRAF3IP1Q8TDR0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRAF3IP1Q8TDR0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TRAF3IP1Q8TDR0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAF3IP1Q8TDR0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.34■■□□□ 1.01
TRAF3IP1Q8TDR0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAF3IP1Q8TDR0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
TRAF3IP1Q8TDR0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAF3IP1Q8TDR0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.33■■□□□ 1.01
TRAF3IP1Q8TDR0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
TRAF3IP1Q8TDR0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRAF3IP1Q8TDR0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAF3IP1Q8TDR0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRAF3IP1Q8TDR0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAF3IP1Q8TDR0 AC034268.1-201ENST00000441047 882 ntBASIC21.33■■□□□ 1.01
TRAF3IP1Q8TDR0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRAF3IP1Q8TDR0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TRAF3IP1Q8TDR0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAF3IP1Q8TDR0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.33■■□□□ 1.01
TRAF3IP1Q8TDR0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
TRAF3IP1Q8TDR0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
TRAF3IP1Q8TDR0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.33■■□□□ 1
TRAF3IP1Q8TDR0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRAF3IP1Q8TDR0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.33■■□□□ 1
TRAF3IP1Q8TDR0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
TRAF3IP1Q8TDR0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.33■■□□□ 1
TRAF3IP1Q8TDR0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 AC116050.2-201ENST00000612102 1779 ntBASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRAF3IP1Q8TDR0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 AC073314.1-201ENST00000568729 2216 ntBASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 AC097381.1-201ENST00000429019 1296 ntBASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAF3IP1Q8TDR0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 SLC7A5P1-201ENST00000568957 537 ntBASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 NTF6G-201ENST00000591094 616 ntBASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 GABARAPL3-202ENST00000624044 1851 ntBASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 AP005212.1-201ENST00000581547 1997 ntBASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 AC092667.1-201ENST00000434301 2586 ntBASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAF3IP1Q8TDR0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms