Protein–RNA interactions for Protein: Q8N443

RIBC1, RIB43A-like with coiled-coils protein 1, humanhuman

Predicted RBP Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIBC1Q8N443 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.61■□□□□ 0.89
RIBC1Q8N443 AC087289.5-201ENST00000586076 3175 ntBASIC20.61■□□□□ 0.89
RIBC1Q8N443 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RIBC1Q8N443 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIBC1Q8N443 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RIBC1Q8N443 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RIBC1Q8N443 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RIBC1Q8N443 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RIBC1Q8N443 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.61■□□□□ 0.89
RIBC1Q8N443 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RIBC1Q8N443 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIBC1Q8N443 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RIBC1Q8N443 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RIBC1Q8N443 MIR4466-201ENST00000606121 54 ntBASIC20.61■□□□□ 0.89
RIBC1Q8N443 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.61■□□□□ 0.89
RIBC1Q8N443 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.61■□□□□ 0.89
RIBC1Q8N443 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.61■□□□□ 0.89
RIBC1Q8N443 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.61■□□□□ 0.89
RIBC1Q8N443 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RIBC1Q8N443 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIBC1Q8N443 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIBC1Q8N443 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RIBC1Q8N443 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIBC1Q8N443 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIBC1Q8N443 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RIBC1Q8N443 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIBC1Q8N443 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIBC1Q8N443 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RIBC1Q8N443 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIBC1Q8N443 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIBC1Q8N443 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIBC1Q8N443 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RIBC1Q8N443 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIBC1Q8N443 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIBC1Q8N443 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIBC1Q8N443 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIBC1Q8N443 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.59■□□□□ 0.89
RIBC1Q8N443 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIBC1Q8N443 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RIBC1Q8N443 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIBC1Q8N443 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.59■□□□□ 0.89
RIBC1Q8N443 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RIBC1Q8N443 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.59■□□□□ 0.89
RIBC1Q8N443 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.59■□□□□ 0.89
RIBC1Q8N443 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RIBC1Q8N443 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.59■□□□□ 0.89
RIBC1Q8N443 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIBC1Q8N443 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.59■□□□□ 0.89
RIBC1Q8N443 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RIBC1Q8N443 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIBC1Q8N443 AC061975.6-201ENST00000579045 1553 ntBASIC20.59■□□□□ 0.89
RIBC1Q8N443 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.58■□□□□ 0.89
RIBC1Q8N443 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIBC1Q8N443 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.58■□□□□ 0.89
RIBC1Q8N443 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIBC1Q8N443 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.58■□□□□ 0.89
RIBC1Q8N443 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RIBC1Q8N443 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RIBC1Q8N443 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIBC1Q8N443 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.58■□□□□ 0.89
RIBC1Q8N443 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.58■□□□□ 0.89
RIBC1Q8N443 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIBC1Q8N443 AL020996.1-203ENST00000536896 2307 ntBASIC20.58■□□□□ 0.89
RIBC1Q8N443 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIBC1Q8N443 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.58■□□□□ 0.89
RIBC1Q8N443 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIBC1Q8N443 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RIBC1Q8N443 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIBC1Q8N443 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RIBC1Q8N443 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RIBC1Q8N443 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.58■□□□□ 0.89
RIBC1Q8N443 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.58■□□□□ 0.89
RIBC1Q8N443 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.58■□□□□ 0.89
RIBC1Q8N443 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.58■□□□□ 0.89
RIBC1Q8N443 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.58■□□□□ 0.89
RIBC1Q8N443 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RIBC1Q8N443 AC233992.3-201ENST00000607491 485 ntBASIC20.58■□□□□ 0.89
RIBC1Q8N443 AL035685.1-201ENST00000636663 812 ntBASIC20.58■□□□□ 0.89
RIBC1Q8N443 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RIBC1Q8N443 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.88
RIBC1Q8N443 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.58■□□□□ 0.88
RIBC1Q8N443 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RIBC1Q8N443 AC125437.2-201ENST00000625180 2167 ntBASIC20.58■□□□□ 0.88
RIBC1Q8N443 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RIBC1Q8N443 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.57■□□□□ 0.88
RIBC1Q8N443 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIBC1Q8N443 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RIBC1Q8N443 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIBC1Q8N443 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.57■□□□□ 0.88
RIBC1Q8N443 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.57■□□□□ 0.88
RIBC1Q8N443 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIBC1Q8N443 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RIBC1Q8N443 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIBC1Q8N443 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RIBC1Q8N443 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIBC1Q8N443 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIBC1Q8N443 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.57■□□□□ 0.88
RIBC1Q8N443 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.57■□□□□ 0.88
RIBC1Q8N443 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIBC1Q8N443 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms