Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC32.26■■■□□ 2.76
VPS8Q8N3P4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
VPS8Q8N3P4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
VPS8Q8N3P4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
VPS8Q8N3P4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
VPS8Q8N3P4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.75
VPS8Q8N3P4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
VPS8Q8N3P4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
VPS8Q8N3P4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
VPS8Q8N3P4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC32.25■■■□□ 2.75
VPS8Q8N3P4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC32.25■■■□□ 2.75
VPS8Q8N3P4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
VPS8Q8N3P4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
VPS8Q8N3P4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
VPS8Q8N3P4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
VPS8Q8N3P4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC32.25■■■□□ 2.75
VPS8Q8N3P4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC32.25■■■□□ 2.75
VPS8Q8N3P4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
VPS8Q8N3P4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
VPS8Q8N3P4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC32.24■■■□□ 2.75
VPS8Q8N3P4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
VPS8Q8N3P4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
VPS8Q8N3P4 KRT8P36-201ENST00000489121 1440 ntBASIC32.24■■■□□ 2.75
VPS8Q8N3P4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
VPS8Q8N3P4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
VPS8Q8N3P4 RNA5SP413-201ENST00000516373 109 ntBASIC32.24■■■□□ 2.75
VPS8Q8N3P4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC32.24■■■□□ 2.75
VPS8Q8N3P4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.75
VPS8Q8N3P4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
VPS8Q8N3P4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC32.24■■■□□ 2.75
VPS8Q8N3P4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
VPS8Q8N3P4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
VPS8Q8N3P4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
VPS8Q8N3P4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
VPS8Q8N3P4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC32.23■■■□□ 2.75
VPS8Q8N3P4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
VPS8Q8N3P4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC32.23■■■□□ 2.75
VPS8Q8N3P4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC32.23■■■□□ 2.75
VPS8Q8N3P4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC32.23■■■□□ 2.75
VPS8Q8N3P4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
VPS8Q8N3P4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
VPS8Q8N3P4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC32.23■■■□□ 2.75
VPS8Q8N3P4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC32.23■■■□□ 2.75
VPS8Q8N3P4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC32.23■■■□□ 2.75
VPS8Q8N3P4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC32.22■■■□□ 2.75
VPS8Q8N3P4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
VPS8Q8N3P4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC32.22■■■□□ 2.75
VPS8Q8N3P4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC32.22■■■□□ 2.75
VPS8Q8N3P4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
VPS8Q8N3P4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
VPS8Q8N3P4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC32.22■■■□□ 2.75
VPS8Q8N3P4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC32.22■■■□□ 2.75
VPS8Q8N3P4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
VPS8Q8N3P4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC32.22■■■□□ 2.75
VPS8Q8N3P4 AC060766.5-201ENST00000590539 871 ntBASIC32.22■■■□□ 2.75
VPS8Q8N3P4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC32.22■■■□□ 2.75
VPS8Q8N3P4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
VPS8Q8N3P4 AC007375.3-201ENST00000600936 2314 ntBASIC32.22■■■□□ 2.75
VPS8Q8N3P4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
VPS8Q8N3P4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
VPS8Q8N3P4 AC005229.4-201ENST00000610085 2198 ntBASIC32.21■■■□□ 2.75
VPS8Q8N3P4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC32.21■■■□□ 2.75
VPS8Q8N3P4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC32.21■■■□□ 2.75
VPS8Q8N3P4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC32.21■■■□□ 2.75
VPS8Q8N3P4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
VPS8Q8N3P4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC32.21■■■□□ 2.75
VPS8Q8N3P4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC32.21■■■□□ 2.75
VPS8Q8N3P4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC32.21■■■□□ 2.75
VPS8Q8N3P4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
VPS8Q8N3P4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC32.21■■■□□ 2.75
VPS8Q8N3P4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC32.2■■■□□ 2.75
VPS8Q8N3P4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
VPS8Q8N3P4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC32.2■■■□□ 2.75
VPS8Q8N3P4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC32.2■■■□□ 2.75
VPS8Q8N3P4 HLA-B-256ENST00000639848 1089 ntBASIC32.2■■■□□ 2.75
VPS8Q8N3P4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
VPS8Q8N3P4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
VPS8Q8N3P4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
VPS8Q8N3P4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
VPS8Q8N3P4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC32.19■■■□□ 2.74
VPS8Q8N3P4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC32.19■■■□□ 2.74
VPS8Q8N3P4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
VPS8Q8N3P4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC32.19■■■□□ 2.74
VPS8Q8N3P4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
VPS8Q8N3P4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
VPS8Q8N3P4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
VPS8Q8N3P4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC32.19■■■□□ 2.74
VPS8Q8N3P4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC32.19■■■□□ 2.74
VPS8Q8N3P4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC32.19■■■□□ 2.74
VPS8Q8N3P4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC32.19■■■□□ 2.74
VPS8Q8N3P4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
VPS8Q8N3P4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC32.18■■■□□ 2.74
VPS8Q8N3P4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC32.18■■■□□ 2.74
VPS8Q8N3P4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
VPS8Q8N3P4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC32.17■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms