Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC28.68■■■□□ 2.18
ARHGEF28Q8N1W1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC28.68■■■□□ 2.18
ARHGEF28Q8N1W1 C2orf69P4-201ENST00000565394 541 ntBASIC28.68■■■□□ 2.18
ARHGEF28Q8N1W1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC28.68■■■□□ 2.18
ARHGEF28Q8N1W1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
ARHGEF28Q8N1W1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
ARHGEF28Q8N1W1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ARHGEF28Q8N1W1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
ARHGEF28Q8N1W1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ARHGEF28Q8N1W1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
ARHGEF28Q8N1W1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
ARHGEF28Q8N1W1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC28.67■■■□□ 2.18
ARHGEF28Q8N1W1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC28.67■■■□□ 2.18
ARHGEF28Q8N1W1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC28.67■■■□□ 2.18
ARHGEF28Q8N1W1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
ARHGEF28Q8N1W1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
ARHGEF28Q8N1W1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
ARHGEF28Q8N1W1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
ARHGEF28Q8N1W1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC28.67■■■□□ 2.18
ARHGEF28Q8N1W1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
ARHGEF28Q8N1W1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
ARHGEF28Q8N1W1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC28.66■■■□□ 2.18
ARHGEF28Q8N1W1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC28.65■■■□□ 2.18
ARHGEF28Q8N1W1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
ARHGEF28Q8N1W1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
ARHGEF28Q8N1W1 AC012618.2-201ENST00000428058 849 ntBASIC28.65■■■□□ 2.18
ARHGEF28Q8N1W1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC28.65■■■□□ 2.18
ARHGEF28Q8N1W1 RPS2P4-201ENST00000476944 856 ntBASIC28.65■■■□□ 2.18
ARHGEF28Q8N1W1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC28.65■■■□□ 2.18
ARHGEF28Q8N1W1 AC005829.2-201ENST00000571422 1056 ntBASIC28.65■■■□□ 2.18
ARHGEF28Q8N1W1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC28.65■■■□□ 2.18
ARHGEF28Q8N1W1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC28.65■■■□□ 2.18
ARHGEF28Q8N1W1 MIR2861-201ENST00000636310 90 ntBASIC28.65■■■□□ 2.18
ARHGEF28Q8N1W1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
ARHGEF28Q8N1W1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC28.64■■■□□ 2.18
ARHGEF28Q8N1W1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
ARHGEF28Q8N1W1 RER1-204ENST00000378518 522 ntTSL 3 BASIC28.64■■■□□ 2.18
ARHGEF28Q8N1W1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
ARHGEF28Q8N1W1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC28.64■■■□□ 2.18
ARHGEF28Q8N1W1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC28.64■■■□□ 2.18
ARHGEF28Q8N1W1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
ARHGEF28Q8N1W1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.17
ARHGEF28Q8N1W1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC28.64■■■□□ 2.17
ARHGEF28Q8N1W1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
ARHGEF28Q8N1W1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 AC124016.1-201ENST00000609552 612 ntBASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 Z98882.1-201ENST00000622160 2253 ntBASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 MTDHP1-201ENST00000605323 784 ntBASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ARHGEF28Q8N1W1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
ARHGEF28Q8N1W1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
ARHGEF28Q8N1W1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC28.62■■■□□ 2.17
ARHGEF28Q8N1W1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
ARHGEF28Q8N1W1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
ARHGEF28Q8N1W1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC28.62■■■□□ 2.17
ARHGEF28Q8N1W1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ARHGEF28Q8N1W1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC28.62■■■□□ 2.17
ARHGEF28Q8N1W1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
ARHGEF28Q8N1W1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ARHGEF28Q8N1W1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC28.61■■■□□ 2.17
ARHGEF28Q8N1W1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC28.61■■■□□ 2.17
ARHGEF28Q8N1W1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ARHGEF28Q8N1W1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ARHGEF28Q8N1W1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ARHGEF28Q8N1W1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ARHGEF28Q8N1W1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC28.61■■■□□ 2.17
ARHGEF28Q8N1W1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ARHGEF28Q8N1W1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ARHGEF28Q8N1W1 AC012676.1-201ENST00000574705 1949 ntBASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms