Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 AC107956.1-201ENST00000494359 873 ntBASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 AC233702.5-201ENST00000584107 538 ntBASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 MTDHP1-201ENST00000605323 784 ntBASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 AC012618.2-201ENST00000428058 849 ntBASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 BX088651.1-201ENST00000540551 451 ntBASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEFF1Q8IYR6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 KRT18P21-201ENST00000515767 1272 ntBASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 AC124016.1-201ENST00000609552 612 ntBASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEFF1Q8IYR6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TMEFF1Q8IYR6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TMEFF1Q8IYR6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEFF1Q8IYR6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
TMEFF1Q8IYR6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.43■□□□□ 0.86
TMEFF1Q8IYR6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.43■□□□□ 0.86
TMEFF1Q8IYR6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.43■□□□□ 0.86
TMEFF1Q8IYR6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEFF1Q8IYR6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEFF1Q8IYR6 AC006557.6-201ENST00000623071 864 ntBASIC20.43■□□□□ 0.86
TMEFF1Q8IYR6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.43■□□□□ 0.86
TMEFF1Q8IYR6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEFF1Q8IYR6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TMEFF1Q8IYR6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEFF1Q8IYR6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEFF1Q8IYR6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEFF1Q8IYR6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 AC239809.2-201ENST00000415381 517 ntBASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 KRT17P2-201ENST00000300992 1314 ntBASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.42■□□□□ 0.86
TMEFF1Q8IYR6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms