Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.5
LINC00346Q8IVM7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LINC00346Q8IVM7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 PCDHAC2-203ENST00000615316 3011 ntBASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC00346Q8IVM7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00346Q8IVM7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 AC020907.5-201ENST00000624372 1936 ntBASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 KRT18P61-201ENST00000585825 1298 ntBASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00346Q8IVM7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00346Q8IVM7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 AL121603.2-201ENST00000557373 2117 ntBASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms