Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SYVN1Q86TM6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
SYVN1Q86TM6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 AC007225.1-201ENST00000566331 1836 ntBASIC20.14■□□□□ 0.81
SYVN1Q86TM6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.14■□□□□ 0.81
SYVN1Q86TM6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 AL355802.2-201ENST00000402069 882 ntBASIC20.14■□□□□ 0.81
SYVN1Q86TM6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYVN1Q86TM6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 AC027702.1-201ENST00000563810 1770 ntBASIC20.13■□□□□ 0.81
SYVN1Q86TM6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 AP001160.3-201ENST00000601484 763 ntBASIC20.13■□□□□ 0.81
SYVN1Q86TM6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYVN1Q86TM6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 UBE2DNL-204ENST00000602536 740 ntBASIC20.12■□□□□ 0.81
SYVN1Q86TM6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.12■□□□□ 0.81
SYVN1Q86TM6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYVN1Q86TM6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SYVN1Q86TM6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SYVN1Q86TM6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SYVN1Q86TM6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYVN1Q86TM6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SYVN1Q86TM6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.11■□□□□ 0.81
SYVN1Q86TM6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.11■□□□□ 0.81
SYVN1Q86TM6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SYVN1Q86TM6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYVN1Q86TM6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.11■□□□□ 0.81
SYVN1Q86TM6 MYCNOS-205ENST00000641950 531 ntBASIC20.11■□□□□ 0.81
SYVN1Q86TM6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SYVN1Q86TM6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYVN1Q86TM6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms