Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CROCCP2Q86T23 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP2Q86T23 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP2Q86T23 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP2Q86T23 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP2Q86T23 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP2Q86T23 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CROCCP2Q86T23 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CROCCP2Q86T23 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP2Q86T23 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP2Q86T23 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.79■□□□□ 0.92
CROCCP2Q86T23 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP2Q86T23 SRD5A1P1-201ENST00000442297 786 ntBASIC20.79■□□□□ 0.92
CROCCP2Q86T23 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.79■□□□□ 0.92
CROCCP2Q86T23 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP2Q86T23 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP2Q86T23 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CROCCP2Q86T23 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP2Q86T23 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP2Q86T23 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 AC098818.2-201ENST00000564925 2320 ntBASIC20.78■□□□□ 0.92
CROCCP2Q86T23 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 SMUG1P1-201ENST00000590640 811 ntBASIC20.78■□□□□ 0.92
CROCCP2Q86T23 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CROCCP2Q86T23 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CROCCP2Q86T23 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CROCCP2Q86T23 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
CROCCP2Q86T23 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CROCCP2Q86T23 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.77■□□□□ 0.92
CROCCP2Q86T23 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CROCCP2Q86T23 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.77■□□□□ 0.92
CROCCP2Q86T23 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.77■□□□□ 0.92
CROCCP2Q86T23 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.77■□□□□ 0.92
CROCCP2Q86T23 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CROCCP2Q86T23 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
CROCCP2Q86T23 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CROCCP2Q86T23 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CROCCP2Q86T23 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CROCCP2Q86T23 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CROCCP2Q86T23 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CROCCP2Q86T23 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CROCCP2Q86T23 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CROCCP2Q86T23 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CROCCP2Q86T23 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CROCCP2Q86T23 AL356740.2-201ENST00000601559 647 ntBASIC20.76■□□□□ 0.91
CROCCP2Q86T23 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CROCCP2Q86T23 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CROCCP2Q86T23 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CROCCP2Q86T23 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CROCCP2Q86T23 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CROCCP2Q86T23 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.75■□□□□ 0.91
CROCCP2Q86T23 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CROCCP2Q86T23 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.75■□□□□ 0.91
CROCCP2Q86T23 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CROCCP2Q86T23 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.75■□□□□ 0.91
CROCCP2Q86T23 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CROCCP2Q86T23 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.75■□□□□ 0.91
CROCCP2Q86T23 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CROCCP2Q86T23 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CROCCP2Q86T23 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CROCCP2Q86T23 SYT6-210ENST00000641643 1587 ntBASIC20.75■□□□□ 0.91
CROCCP2Q86T23 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CROCCP2Q86T23 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CROCCP2Q86T23 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms