Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTCHD4Q6ZW05 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTCHD4Q6ZW05 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.83■□□□□ 0.61
PTCHD4Q6ZW05 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PTCHD4Q6ZW05 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PTCHD4Q6ZW05 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTCHD4Q6ZW05 EDA-201ENST00000338901 1233 ntBASIC18.83■□□□□ 0.6
PTCHD4Q6ZW05 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTCHD4Q6ZW05 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.83■□□□□ 0.6
PTCHD4Q6ZW05 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.83■□□□□ 0.6
PTCHD4Q6ZW05 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.83■□□□□ 0.6
PTCHD4Q6ZW05 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
PTCHD4Q6ZW05 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTCHD4Q6ZW05 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.83■□□□□ 0.6
PTCHD4Q6ZW05 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTCHD4Q6ZW05 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PTCHD4Q6ZW05 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTCHD4Q6ZW05 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PTCHD4Q6ZW05 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTCHD4Q6ZW05 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTCHD4Q6ZW05 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.83■□□□□ 0.6
PTCHD4Q6ZW05 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTCHD4Q6ZW05 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 AL162377.1-201ENST00000618844 1793 ntBASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.82■□□□□ 0.6
PTCHD4Q6ZW05 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 AF213884.3-201ENST00000563833 479 ntBASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 AL355001.2-201ENST00000620617 1191 ntBASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 AC005224.4-201ENST00000583262 1652 ntBASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCHD4Q6ZW05 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCHD4Q6ZW05 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.8■□□□□ 0.6
PTCHD4Q6ZW05 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.8■□□□□ 0.6
PTCHD4Q6ZW05 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.8■□□□□ 0.6
PTCHD4Q6ZW05 MIR939-201ENST00000401314 82 ntBASIC18.8■□□□□ 0.6
PTCHD4Q6ZW05 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.8■□□□□ 0.6
PTCHD4Q6ZW05 AL031432.3-201ENST00000607698 485 ntBASIC18.8■□□□□ 0.6
PTCHD4Q6ZW05 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTCHD4Q6ZW05 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCHD4Q6ZW05 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCHD4Q6ZW05 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCHD4Q6ZW05 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCHD4Q6ZW05 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCHD4Q6ZW05 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCHD4Q6ZW05 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTCHD4Q6ZW05 RASA4CP-201ENST00000424092 1398 ntBASIC18.8■□□□□ 0.6
PTCHD4Q6ZW05 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCHD4Q6ZW05 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 AC099778.1-201ENST00000568593 1911 ntBASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms