Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.64■□□□□ 0.89
GDPD4Q6W3E5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GDPD4Q6W3E5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GDPD4Q6W3E5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
GDPD4Q6W3E5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GDPD4Q6W3E5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GDPD4Q6W3E5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GDPD4Q6W3E5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
GDPD4Q6W3E5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GDPD4Q6W3E5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GDPD4Q6W3E5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GDPD4Q6W3E5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
GDPD4Q6W3E5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.63■□□□□ 0.89
GDPD4Q6W3E5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GDPD4Q6W3E5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GDPD4Q6W3E5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDPD4Q6W3E5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDPD4Q6W3E5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDPD4Q6W3E5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDPD4Q6W3E5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.63■□□□□ 0.89
GDPD4Q6W3E5 AC105020.6-201ENST00000621523 1217 ntBASIC20.63■□□□□ 0.89
GDPD4Q6W3E5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDPD4Q6W3E5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDPD4Q6W3E5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDPD4Q6W3E5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDPD4Q6W3E5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GDPD4Q6W3E5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.62■□□□□ 0.89
GDPD4Q6W3E5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDPD4Q6W3E5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDPD4Q6W3E5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.62■□□□□ 0.89
GDPD4Q6W3E5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GDPD4Q6W3E5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GDPD4Q6W3E5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDPD4Q6W3E5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GDPD4Q6W3E5 CD99P1-205ENST00000527459 561 ntBASIC20.62■□□□□ 0.89
GDPD4Q6W3E5 AC083880.1-201ENST00000608266 535 ntBASIC20.62■□□□□ 0.89
GDPD4Q6W3E5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
GDPD4Q6W3E5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDPD4Q6W3E5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
GDPD4Q6W3E5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDPD4Q6W3E5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDPD4Q6W3E5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.62■□□□□ 0.89
GDPD4Q6W3E5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDPD4Q6W3E5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
GDPD4Q6W3E5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
GDPD4Q6W3E5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDPD4Q6W3E5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
GDPD4Q6W3E5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDPD4Q6W3E5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GDPD4Q6W3E5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDPD4Q6W3E5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GDPD4Q6W3E5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDPD4Q6W3E5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDPD4Q6W3E5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.61■□□□□ 0.89
GDPD4Q6W3E5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.61■□□□□ 0.89
GDPD4Q6W3E5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.61■□□□□ 0.89
GDPD4Q6W3E5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDPD4Q6W3E5 AC027702.1-201ENST00000563810 1770 ntBASIC20.61■□□□□ 0.89
GDPD4Q6W3E5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GDPD4Q6W3E5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GDPD4Q6W3E5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GDPD4Q6W3E5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GDPD4Q6W3E5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GDPD4Q6W3E5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GDPD4Q6W3E5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.6■□□□□ 0.89
GDPD4Q6W3E5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.6■□□□□ 0.89
GDPD4Q6W3E5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.6■□□□□ 0.89
GDPD4Q6W3E5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.6■□□□□ 0.89
GDPD4Q6W3E5 AL356652.1-201ENST00000615962 565 ntBASIC20.6■□□□□ 0.89
GDPD4Q6W3E5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
GDPD4Q6W3E5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GDPD4Q6W3E5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.58■□□□□ 0.89
GDPD4Q6W3E5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GDPD4Q6W3E5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.58■□□□□ 0.89
GDPD4Q6W3E5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms