Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PACS1Q6VY07 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PACS1Q6VY07 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.71■□□□□ 0.91
PACS1Q6VY07 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PACS1Q6VY07 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PACS1Q6VY07 AC120498.10-201ENST00000621827 505 ntBASIC20.71■□□□□ 0.91
PACS1Q6VY07 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.71■□□□□ 0.91
PACS1Q6VY07 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PACS1Q6VY07 AC011484.1-201ENST00000377652 1995 ntBASIC20.71■□□□□ 0.91
PACS1Q6VY07 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PACS1Q6VY07 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PACS1Q6VY07 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PACS1Q6VY07 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PACS1Q6VY07 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PACS1Q6VY07 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PACS1Q6VY07 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PACS1Q6VY07 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PACS1Q6VY07 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PACS1Q6VY07 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PACS1Q6VY07 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PACS1Q6VY07 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
PACS1Q6VY07 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
PACS1Q6VY07 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.7■□□□□ 0.9
PACS1Q6VY07 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.7■□□□□ 0.9
PACS1Q6VY07 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
PACS1Q6VY07 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PACS1Q6VY07 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.7■□□□□ 0.9
PACS1Q6VY07 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.7■□□□□ 0.9
PACS1Q6VY07 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.7■□□□□ 0.9
PACS1Q6VY07 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.7■□□□□ 0.9
PACS1Q6VY07 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.7■□□□□ 0.9
PACS1Q6VY07 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PACS1Q6VY07 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PACS1Q6VY07 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.7■□□□□ 0.9
PACS1Q6VY07 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PACS1Q6VY07 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PACS1Q6VY07 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PACS1Q6VY07 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PACS1Q6VY07 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PACS1Q6VY07 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.7■□□□□ 0.9
PACS1Q6VY07 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PACS1Q6VY07 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PACS1Q6VY07 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PACS1Q6VY07 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PACS1Q6VY07 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PACS1Q6VY07 AL391422.3-201ENST00000603791 2761 ntBASIC20.69■□□□□ 0.9
PACS1Q6VY07 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PACS1Q6VY07 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PACS1Q6VY07 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.69■□□□□ 0.9
PACS1Q6VY07 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.69■□□□□ 0.9
PACS1Q6VY07 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PACS1Q6VY07 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PACS1Q6VY07 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PACS1Q6VY07 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.69■□□□□ 0.9
PACS1Q6VY07 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PACS1Q6VY07 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.69■□□□□ 0.9
PACS1Q6VY07 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.68■□□□□ 0.9
PACS1Q6VY07 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PACS1Q6VY07 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PACS1Q6VY07 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PACS1Q6VY07 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.68■□□□□ 0.9
PACS1Q6VY07 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PACS1Q6VY07 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.68■□□□□ 0.9
PACS1Q6VY07 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PACS1Q6VY07 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.68■□□□□ 0.9
PACS1Q6VY07 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PACS1Q6VY07 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PACS1Q6VY07 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PACS1Q6VY07 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PACS1Q6VY07 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.67■□□□□ 0.9
PACS1Q6VY07 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PACS1Q6VY07 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PACS1Q6VY07 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PACS1Q6VY07 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PACS1Q6VY07 MIR935-201ENST00000401179 91 ntBASIC20.67■□□□□ 0.9
PACS1Q6VY07 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.67■□□□□ 0.9
PACS1Q6VY07 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PACS1Q6VY07 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.67■□□□□ 0.9
PACS1Q6VY07 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PACS1Q6VY07 AL162430.1-201ENST00000480705 870 ntBASIC20.67■□□□□ 0.9
PACS1Q6VY07 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PACS1Q6VY07 SLC7A5P1-201ENST00000568957 537 ntBASIC20.67■□□□□ 0.9
PACS1Q6VY07 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PACS1Q6VY07 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
PACS1Q6VY07 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.67■□□□□ 0.9
PACS1Q6VY07 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PACS1Q6VY07 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PACS1Q6VY07 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.67■□□□□ 0.9
PACS1Q6VY07 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PACS1Q6VY07 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PACS1Q6VY07 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PACS1Q6VY07 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PACS1Q6VY07 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PACS1Q6VY07 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PACS1Q6VY07 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PACS1Q6VY07 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PACS1Q6VY07 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.66■□□□□ 0.9
PACS1Q6VY07 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PACS1Q6VY07 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PACS1Q6VY07 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms