Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.69■□□□□ 0.9
CAPRIN2Q6IMN6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPRIN2Q6IMN6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.69■□□□□ 0.9
CAPRIN2Q6IMN6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.69■□□□□ 0.9
CAPRIN2Q6IMN6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPRIN2Q6IMN6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPRIN2Q6IMN6 AC026471.1-201ENST00000564629 3026 ntBASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 AP001160.3-201ENST00000601484 763 ntBASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 AC092437.1-201ENST00000624794 1048 ntBASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CAPRIN2Q6IMN6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPRIN2Q6IMN6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAPRIN2Q6IMN6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAPRIN2Q6IMN6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.67■□□□□ 0.9
CAPRIN2Q6IMN6 ID1-201ENST00000376105 1233 ntBASIC20.67■□□□□ 0.9
CAPRIN2Q6IMN6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.67■□□□□ 0.9
CAPRIN2Q6IMN6 AC010141.2-201ENST00000452426 721 ntBASIC20.67■□□□□ 0.9
CAPRIN2Q6IMN6 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.67■□□□□ 0.9
CAPRIN2Q6IMN6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPRIN2Q6IMN6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CAPRIN2Q6IMN6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAPRIN2Q6IMN6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPRIN2Q6IMN6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPRIN2Q6IMN6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAPRIN2Q6IMN6 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.66■□□□□ 0.9
CAPRIN2Q6IMN6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.66■□□□□ 0.9
CAPRIN2Q6IMN6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.66■□□□□ 0.9
CAPRIN2Q6IMN6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPRIN2Q6IMN6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.66■□□□□ 0.9
CAPRIN2Q6IMN6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CAPRIN2Q6IMN6 AC006015.1-201ENST00000429970 570 ntBASIC20.66■□□□□ 0.9
CAPRIN2Q6IMN6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.66■□□□□ 0.9
CAPRIN2Q6IMN6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.66■□□□□ 0.9
CAPRIN2Q6IMN6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPRIN2Q6IMN6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CAPRIN2Q6IMN6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPRIN2Q6IMN6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPRIN2Q6IMN6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 AC137761.2-201ENST00000561729 223 ntBASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 AC145350.3-201ENST00000569033 163 ntBASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPRIN2Q6IMN6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CAPRIN2Q6IMN6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.64■□□□□ 0.9
CAPRIN2Q6IMN6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CAPRIN2Q6IMN6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CAPRIN2Q6IMN6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CAPRIN2Q6IMN6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
CAPRIN2Q6IMN6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPRIN2Q6IMN6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPRIN2Q6IMN6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms