Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.27■□□□□ 0.83
LYSMD4Q5XG99 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.27■□□□□ 0.83
LYSMD4Q5XG99 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
LYSMD4Q5XG99 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LYSMD4Q5XG99 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LYSMD4Q5XG99 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.26■□□□□ 0.83
LYSMD4Q5XG99 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD4Q5XG99 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD4Q5XG99 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.26■□□□□ 0.83
LYSMD4Q5XG99 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD4Q5XG99 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD4Q5XG99 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD4Q5XG99 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.26■□□□□ 0.83
LYSMD4Q5XG99 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.26■□□□□ 0.83
LYSMD4Q5XG99 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.26■□□□□ 0.83
LYSMD4Q5XG99 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LYSMD4Q5XG99 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD4Q5XG99 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LYSMD4Q5XG99 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.26■□□□□ 0.83
LYSMD4Q5XG99 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD4Q5XG99 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 C1orf229-201ENST00000623686 2258 ntBASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.25■□□□□ 0.83
LYSMD4Q5XG99 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD4Q5XG99 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD4Q5XG99 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD4Q5XG99 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD4Q5XG99 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LYSMD4Q5XG99 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.24■□□□□ 0.83
LYSMD4Q5XG99 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.24■□□□□ 0.83
LYSMD4Q5XG99 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.24■□□□□ 0.83
LYSMD4Q5XG99 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD4Q5XG99 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.24■□□□□ 0.83
LYSMD4Q5XG99 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LYSMD4Q5XG99 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
LYSMD4Q5XG99 AL356652.1-201ENST00000615962 565 ntBASIC20.24■□□□□ 0.83
LYSMD4Q5XG99 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD4Q5XG99 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LYSMD4Q5XG99 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
LYSMD4Q5XG99 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 TSPY15P-201ENST00000457163 923 ntBASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
LYSMD4Q5XG99 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
LYSMD4Q5XG99 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
LYSMD4Q5XG99 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD4Q5XG99 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD4Q5XG99 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.22■□□□□ 0.83
LYSMD4Q5XG99 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD4Q5XG99 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD4Q5XG99 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD4Q5XG99 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.22■□□□□ 0.83
LYSMD4Q5XG99 AL355075.4-201ENST00000554988 638 ntBASIC20.22■□□□□ 0.83
LYSMD4Q5XG99 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.22■□□□□ 0.83
LYSMD4Q5XG99 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD4Q5XG99 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD4Q5XG99 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD4Q5XG99 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LYSMD4Q5XG99 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD4Q5XG99 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.22■□□□□ 0.83
LYSMD4Q5XG99 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LYSMD4Q5XG99 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LYSMD4Q5XG99 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LYSMD4Q5XG99 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.21■□□□□ 0.83
LYSMD4Q5XG99 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms