Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF220Q5VTB9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF220Q5VTB9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF220Q5VTB9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RNF220Q5VTB9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF220Q5VTB9 IGHV3-19-201ENST00000521488 291 ntBASIC19.67■□□□□ 0.74
RNF220Q5VTB9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF220Q5VTB9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF220Q5VTB9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF220Q5VTB9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RNF220Q5VTB9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF220Q5VTB9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF220Q5VTB9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF220Q5VTB9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF220Q5VTB9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
RNF220Q5VTB9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 AC096631.2-201ENST00000436136 790 ntBASIC19.65■□□□□ 0.74
RNF220Q5VTB9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 AC126544.1-201ENST00000580842 1059 ntBASIC19.65■□□□□ 0.74
RNF220Q5VTB9 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF220Q5VTB9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
RNF220Q5VTB9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF220Q5VTB9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF220Q5VTB9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF220Q5VTB9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.64■□□□□ 0.74
RNF220Q5VTB9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RNF220Q5VTB9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF220Q5VTB9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
RNF220Q5VTB9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF220Q5VTB9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF220Q5VTB9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF220Q5VTB9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF220Q5VTB9 SMUG1P1-201ENST00000590640 811 ntBASIC19.64■□□□□ 0.73
RNF220Q5VTB9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF220Q5VTB9 AC106739.1-201ENST00000617035 715 ntBASIC19.64■□□□□ 0.73
RNF220Q5VTB9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF220Q5VTB9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF220Q5VTB9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RNF220Q5VTB9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF220Q5VTB9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF220Q5VTB9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF220Q5VTB9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF220Q5VTB9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF220Q5VTB9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF220Q5VTB9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF220Q5VTB9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF220Q5VTB9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF220Q5VTB9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF220Q5VTB9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF220Q5VTB9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF220Q5VTB9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF220Q5VTB9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF220Q5VTB9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF220Q5VTB9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms