Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 AL589743.5-201ENST00000616611 1050 ntBASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 PNMA6B-201ENST00000538162 1200 ntBASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 ESRRAP1-201ENST00000400596 1257 ntBASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ARFGEF3Q5TH69 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.46■□□□□ 0.38
ARFGEF3Q5TH69 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
ARFGEF3Q5TH69 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 AC244015.2-201ENST00000616358 1861 ntBASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 GCSHP5-201ENST00000443090 522 ntBASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.45■□□□□ 0.38
ARFGEF3Q5TH69 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ARFGEF3Q5TH69 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ARFGEF3Q5TH69 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARFGEF3Q5TH69 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARFGEF3Q5TH69 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
ARFGEF3Q5TH69 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ARFGEF3Q5TH69 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.44■□□□□ 0.38
ARFGEF3Q5TH69 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.44■□□□□ 0.38
ARFGEF3Q5TH69 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ARFGEF3Q5TH69 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.44■□□□□ 0.38
ARFGEF3Q5TH69 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.44■□□□□ 0.38
ARFGEF3Q5TH69 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ARFGEF3Q5TH69 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ARFGEF3Q5TH69 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ARFGEF3Q5TH69 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.44■□□□□ 0.38
ARFGEF3Q5TH69 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ARFGEF3Q5TH69 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 AC006058.3-201ENST00000606217 1069 ntBASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ARFGEF3Q5TH69 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.42■□□□□ 0.38
ARFGEF3Q5TH69 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ARFGEF3Q5TH69 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ARFGEF3Q5TH69 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARFGEF3Q5TH69 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.42■□□□□ 0.38
ARFGEF3Q5TH69 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARFGEF3Q5TH69 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.42■□□□□ 0.38
ARFGEF3Q5TH69 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.42■□□□□ 0.38
ARFGEF3Q5TH69 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ARFGEF3Q5TH69 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ARFGEF3Q5TH69 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms