Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.8■■□□□ 1.08
VARS2Q5ST30 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.8■■□□□ 1.08
VARS2Q5ST30 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.8■■□□□ 1.08
VARS2Q5ST30 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VARS2Q5ST30 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VARS2Q5ST30 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VARS2Q5ST30 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VARS2Q5ST30 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VARS2Q5ST30 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VARS2Q5ST30 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
VARS2Q5ST30 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
VARS2Q5ST30 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.79■■□□□ 1.08
VARS2Q5ST30 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VARS2Q5ST30 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VARS2Q5ST30 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
VARS2Q5ST30 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VARS2Q5ST30 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.79■■□□□ 1.08
VARS2Q5ST30 UNC93B4-201ENST00000505679 747 ntBASIC21.79■■□□□ 1.08
VARS2Q5ST30 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.79■■□□□ 1.08
VARS2Q5ST30 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VARS2Q5ST30 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VARS2Q5ST30 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VARS2Q5ST30 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VARS2Q5ST30 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.78■■□□□ 1.08
VARS2Q5ST30 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VARS2Q5ST30 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
VARS2Q5ST30 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VARS2Q5ST30 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VARS2Q5ST30 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VARS2Q5ST30 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VARS2Q5ST30 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VARS2Q5ST30 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.78■■□□□ 1.08
VARS2Q5ST30 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
VARS2Q5ST30 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.78■■□□□ 1.08
VARS2Q5ST30 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.78■■□□□ 1.08
VARS2Q5ST30 AL356652.1-201ENST00000615962 565 ntBASIC21.78■■□□□ 1.08
VARS2Q5ST30 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VARS2Q5ST30 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
VARS2Q5ST30 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VARS2Q5ST30 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.77■■□□□ 1.08
VARS2Q5ST30 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
VARS2Q5ST30 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VARS2Q5ST30 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VARS2Q5ST30 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VARS2Q5ST30 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.77■■□□□ 1.08
VARS2Q5ST30 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VARS2Q5ST30 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.77■■□□□ 1.08
VARS2Q5ST30 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.77■■□□□ 1.08
VARS2Q5ST30 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.77■■□□□ 1.08
VARS2Q5ST30 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VARS2Q5ST30 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.77■■□□□ 1.08
VARS2Q5ST30 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
VARS2Q5ST30 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
VARS2Q5ST30 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
VARS2Q5ST30 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
VARS2Q5ST30 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
VARS2Q5ST30 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VARS2Q5ST30 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VARS2Q5ST30 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
VARS2Q5ST30 AC011484.1-201ENST00000377652 1995 ntBASIC21.76■■□□□ 1.07
VARS2Q5ST30 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VARS2Q5ST30 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VARS2Q5ST30 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
VARS2Q5ST30 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.76■■□□□ 1.07
VARS2Q5ST30 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VARS2Q5ST30 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VARS2Q5ST30 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
VARS2Q5ST30 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.76■■□□□ 1.07
VARS2Q5ST30 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.76■■□□□ 1.07
VARS2Q5ST30 AL158047.1-201ENST00000445918 881 ntBASIC21.76■■□□□ 1.07
VARS2Q5ST30 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.76■■□□□ 1.07
VARS2Q5ST30 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.76■■□□□ 1.07
VARS2Q5ST30 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.76■■□□□ 1.07
VARS2Q5ST30 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.76■■□□□ 1.07
VARS2Q5ST30 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VARS2Q5ST30 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VARS2Q5ST30 AC142381.4-202ENST00000563973 229 ntBASIC21.76■■□□□ 1.07
VARS2Q5ST30 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.76■■□□□ 1.07
VARS2Q5ST30 SOX15-203ENST00000570788 1093 ntBASIC21.76■■□□□ 1.07
VARS2Q5ST30 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.76■■□□□ 1.07
VARS2Q5ST30 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VARS2Q5ST30 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.76■■□□□ 1.07
VARS2Q5ST30 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VARS2Q5ST30 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.76■■□□□ 1.07
VARS2Q5ST30 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.76■■□□□ 1.07
VARS2Q5ST30 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.75■■□□□ 1.07
VARS2Q5ST30 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VARS2Q5ST30 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VARS2Q5ST30 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VARS2Q5ST30 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.75■■□□□ 1.07
VARS2Q5ST30 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VARS2Q5ST30 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VARS2Q5ST30 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VARS2Q5ST30 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.75■■□□□ 1.07
VARS2Q5ST30 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.75■■□□□ 1.07
VARS2Q5ST30 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.75■■□□□ 1.07
VARS2Q5ST30 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VARS2Q5ST30 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
VARS2Q5ST30 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VARS2Q5ST30 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms