Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFTN2Q52LD8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.72■□□□□ 0.75
RFTN2Q52LD8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.72■□□□□ 0.75
RFTN2Q52LD8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFTN2Q52LD8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFTN2Q52LD8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFTN2Q52LD8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RFTN2Q52LD8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFTN2Q52LD8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.72■□□□□ 0.75
RFTN2Q52LD8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 MIR638-201ENST00000385237 100 ntBASIC19.71■□□□□ 0.75
RFTN2Q52LD8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 AC104187.1-201ENST00000607510 612 ntBASIC19.71■□□□□ 0.75
RFTN2Q52LD8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RFTN2Q52LD8 AFG3L1P-217ENST00000557444 2447 ntBASIC19.71■□□□□ 0.75
RFTN2Q52LD8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFTN2Q52LD8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFTN2Q52LD8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFTN2Q52LD8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFTN2Q52LD8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFTN2Q52LD8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.7■□□□□ 0.74
RFTN2Q52LD8 SLC7A5P2-201ENST00000553010 536 ntBASIC19.7■□□□□ 0.74
RFTN2Q52LD8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.7■□□□□ 0.74
RFTN2Q52LD8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.7■□□□□ 0.74
RFTN2Q52LD8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFTN2Q52LD8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RFTN2Q52LD8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.7■□□□□ 0.74
RFTN2Q52LD8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.7■□□□□ 0.74
RFTN2Q52LD8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.7■□□□□ 0.74
RFTN2Q52LD8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.69■□□□□ 0.74
RFTN2Q52LD8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFTN2Q52LD8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFTN2Q52LD8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFTN2Q52LD8 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.69■□□□□ 0.74
RFTN2Q52LD8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFTN2Q52LD8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFTN2Q52LD8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFTN2Q52LD8 AC245052.3-201ENST00000450182 901 ntBASIC19.69■□□□□ 0.74
RFTN2Q52LD8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.69■□□□□ 0.74
RFTN2Q52LD8 AC120498.10-201ENST00000621827 505 ntBASIC19.69■□□□□ 0.74
RFTN2Q52LD8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RFTN2Q52LD8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.69■□□□□ 0.74
RFTN2Q52LD8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.69■□□□□ 0.74
RFTN2Q52LD8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.69■□□□□ 0.74
RFTN2Q52LD8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFTN2Q52LD8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.69■□□□□ 0.74
RFTN2Q52LD8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFTN2Q52LD8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 DUX4L2-201ENST00000561772 1275 ntBASIC19.68■□□□□ 0.74
RFTN2Q52LD8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 DUX4L6-201ENST00000626483 1275 ntBASIC19.68■□□□□ 0.74
RFTN2Q52LD8 DUX4L1-201ENST00000627662 1275 ntBASIC19.68■□□□□ 0.74
RFTN2Q52LD8 DUX4L8-201ENST00000629013 1275 ntBASIC19.68■□□□□ 0.74
RFTN2Q52LD8 DUX4L3-201ENST00000630187 1275 ntBASIC19.68■□□□□ 0.74
RFTN2Q52LD8 DUX4L7-201ENST00000630678 1275 ntBASIC19.68■□□□□ 0.74
RFTN2Q52LD8 DUX4L5-201ENST00000630834 1275 ntBASIC19.68■□□□□ 0.74
RFTN2Q52LD8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 AC099778.1-201ENST00000568593 1911 ntBASIC19.68■□□□□ 0.74
RFTN2Q52LD8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.68■□□□□ 0.74
RFTN2Q52LD8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.67■□□□□ 0.74
RFTN2Q52LD8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFTN2Q52LD8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.67■□□□□ 0.74
RFTN2Q52LD8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms