Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC24.1■■□□□ 1.45
CERKLQ49MI3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CERKLQ49MI3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CERKLQ49MI3 SOX15-203ENST00000570788 1093 ntBASIC24.1■■□□□ 1.45
CERKLQ49MI3 AL356652.1-201ENST00000615962 565 ntBASIC24.1■■□□□ 1.45
CERKLQ49MI3 AP006294.2-201ENST00000641667 209 ntBASIC24.1■■□□□ 1.45
CERKLQ49MI3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CERKLQ49MI3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CERKLQ49MI3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
CERKLQ49MI3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CERKLQ49MI3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC24.1■■□□□ 1.45
CERKLQ49MI3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
CERKLQ49MI3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CERKLQ49MI3 Z98882.1-201ENST00000622160 2253 ntBASIC24.09■■□□□ 1.45
CERKLQ49MI3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CERKLQ49MI3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CERKLQ49MI3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC24.09■■□□□ 1.45
CERKLQ49MI3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CERKLQ49MI3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CERKLQ49MI3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC24.09■■□□□ 1.45
CERKLQ49MI3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC24.09■■□□□ 1.45
CERKLQ49MI3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC24.09■■□□□ 1.45
CERKLQ49MI3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CERKLQ49MI3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CERKLQ49MI3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CERKLQ49MI3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CERKLQ49MI3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
CERKLQ49MI3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CERKLQ49MI3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CERKLQ49MI3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CERKLQ49MI3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CERKLQ49MI3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC24.08■■□□□ 1.45
CERKLQ49MI3 KRT17P3-201ENST00000420566 1262 ntBASIC24.08■■□□□ 1.45
CERKLQ49MI3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CERKLQ49MI3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.08■■□□□ 1.45
CERKLQ49MI3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
CERKLQ49MI3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
CERKLQ49MI3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.08■■□□□ 1.45
CERKLQ49MI3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.08■■□□□ 1.44
CERKLQ49MI3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CERKLQ49MI3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC24.08■■□□□ 1.44
CERKLQ49MI3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CERKLQ49MI3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC24.08■■□□□ 1.44
CERKLQ49MI3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.07■■□□□ 1.44
CERKLQ49MI3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CERKLQ49MI3 AC011484.1-201ENST00000377652 1995 ntBASIC24.07■■□□□ 1.44
CERKLQ49MI3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CERKLQ49MI3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC24.07■■□□□ 1.44
CERKLQ49MI3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CERKLQ49MI3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CERKLQ49MI3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
CERKLQ49MI3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24.07■■□□□ 1.44
CERKLQ49MI3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.07■■□□□ 1.44
CERKLQ49MI3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC24.07■■□□□ 1.44
CERKLQ49MI3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CERKLQ49MI3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CERKLQ49MI3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.06■■□□□ 1.44
CERKLQ49MI3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CERKLQ49MI3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CERKLQ49MI3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CERKLQ49MI3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC24.06■■□□□ 1.44
CERKLQ49MI3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.06■■□□□ 1.44
CERKLQ49MI3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC24.06■■□□□ 1.44
CERKLQ49MI3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CERKLQ49MI3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CERKLQ49MI3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CERKLQ49MI3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CERKLQ49MI3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CERKLQ49MI3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CERKLQ49MI3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.06■■□□□ 1.44
CERKLQ49MI3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
CERKLQ49MI3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CERKLQ49MI3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CERKLQ49MI3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CERKLQ49MI3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CERKLQ49MI3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.05■■□□□ 1.44
CERKLQ49MI3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC24.05■■□□□ 1.44
CERKLQ49MI3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
CERKLQ49MI3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC24.05■■□□□ 1.44
CERKLQ49MI3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
CERKLQ49MI3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CERKLQ49MI3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CERKLQ49MI3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CERKLQ49MI3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
CERKLQ49MI3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.04■■□□□ 1.44
CERKLQ49MI3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.04■■□□□ 1.44
CERKLQ49MI3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CERKLQ49MI3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC24.04■■□□□ 1.44
CERKLQ49MI3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
CERKLQ49MI3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24.04■■□□□ 1.44
CERKLQ49MI3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC24.04■■□□□ 1.44
CERKLQ49MI3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC24.04■■□□□ 1.44
CERKLQ49MI3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC24.04■■□□□ 1.44
CERKLQ49MI3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC24.04■■□□□ 1.44
CERKLQ49MI3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC24.04■■□□□ 1.44
CERKLQ49MI3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC24.04■■□□□ 1.44
CERKLQ49MI3 AL359736.2-201ENST00000621992 437 ntBASIC24.04■■□□□ 1.44
CERKLQ49MI3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC24.04■■□□□ 1.44
CERKLQ49MI3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CERKLQ49MI3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms