Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.75■■□□□ 1.55
PDS5AQ29RF7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PDS5AQ29RF7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDS5AQ29RF7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.75■■□□□ 1.55
PDS5AQ29RF7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDS5AQ29RF7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDS5AQ29RF7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PDS5AQ29RF7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PDS5AQ29RF7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC24.74■■□□□ 1.55
PDS5AQ29RF7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PDS5AQ29RF7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PDS5AQ29RF7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC24.74■■□□□ 1.55
PDS5AQ29RF7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
PDS5AQ29RF7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PDS5AQ29RF7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
PDS5AQ29RF7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
PDS5AQ29RF7 AL024507.2-201ENST00000606070 2574 ntBASIC24.74■■□□□ 1.55
PDS5AQ29RF7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PDS5AQ29RF7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PDS5AQ29RF7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PDS5AQ29RF7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PDS5AQ29RF7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 AC066615.1-201ENST00000640911 628 ntBASIC24.73■■□□□ 1.55
PDS5AQ29RF7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
PDS5AQ29RF7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
PDS5AQ29RF7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PDS5AQ29RF7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
PDS5AQ29RF7 GCSHP5-201ENST00000443090 522 ntBASIC24.72■■□□□ 1.55
PDS5AQ29RF7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
PDS5AQ29RF7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC24.72■■□□□ 1.55
PDS5AQ29RF7 AC073648.6-201ENST00000641589 218 ntBASIC24.72■■□□□ 1.55
PDS5AQ29RF7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.72■■□□□ 1.55
PDS5AQ29RF7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
PDS5AQ29RF7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PDS5AQ29RF7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
PDS5AQ29RF7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.72■■□□□ 1.55
PDS5AQ29RF7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.72■■□□□ 1.55
PDS5AQ29RF7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PDS5AQ29RF7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PDS5AQ29RF7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PDS5AQ29RF7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.71■■□□□ 1.55
PDS5AQ29RF7 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.71■■□□□ 1.55
PDS5AQ29RF7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC24.71■■□□□ 1.55
PDS5AQ29RF7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC24.71■■□□□ 1.55
PDS5AQ29RF7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.71■■□□□ 1.55
PDS5AQ29RF7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.71■■□□□ 1.55
PDS5AQ29RF7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
PDS5AQ29RF7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC24.7■■□□□ 1.55
PDS5AQ29RF7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.7■■□□□ 1.55
PDS5AQ29RF7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PDS5AQ29RF7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PDS5AQ29RF7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PDS5AQ29RF7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.7■■□□□ 1.54
PDS5AQ29RF7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PDS5AQ29RF7 SOX15-203ENST00000570788 1093 ntBASIC24.7■■□□□ 1.54
PDS5AQ29RF7 MIR2861-201ENST00000636310 90 ntBASIC24.7■■□□□ 1.54
PDS5AQ29RF7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PDS5AQ29RF7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PDS5AQ29RF7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PDS5AQ29RF7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC24.7■■□□□ 1.54
PDS5AQ29RF7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
PDS5AQ29RF7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.7■■□□□ 1.54
PDS5AQ29RF7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
PDS5AQ29RF7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PDS5AQ29RF7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
PDS5AQ29RF7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PDS5AQ29RF7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.69■■□□□ 1.54
PDS5AQ29RF7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PDS5AQ29RF7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PDS5AQ29RF7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PDS5AQ29RF7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC24.69■■□□□ 1.54
PDS5AQ29RF7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24.69■■□□□ 1.54
PDS5AQ29RF7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC24.69■■□□□ 1.54
PDS5AQ29RF7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC24.69■■□□□ 1.54
PDS5AQ29RF7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC24.69■■□□□ 1.54
PDS5AQ29RF7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.69■■□□□ 1.54
PDS5AQ29RF7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PDS5AQ29RF7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PDS5AQ29RF7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PDS5AQ29RF7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PDS5AQ29RF7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PDS5AQ29RF7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
PDS5AQ29RF7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms