Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC073314.1-201ENST00000568729 2216 ntBASIC19.78■□□□□ 0.76
PCDH1Q08174 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH1Q08174 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH1Q08174 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH1Q08174 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH1Q08174 AC006015.1-201ENST00000429970 570 ntBASIC19.78■□□□□ 0.76
PCDH1Q08174 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.78■□□□□ 0.76
PCDH1Q08174 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.78■□□□□ 0.76
PCDH1Q08174 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH1Q08174 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDH1Q08174 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PCDH1Q08174 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH1Q08174 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH1Q08174 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH1Q08174 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
PCDH1Q08174 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH1Q08174 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH1Q08174 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH1Q08174 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PCDH1Q08174 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH1Q08174 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH1Q08174 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
PCDH1Q08174 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH1Q08174 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH1Q08174 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDH1Q08174 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH1Q08174 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDH1Q08174 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH1Q08174 AL157384.1-201ENST00000445995 2473 ntBASIC19.77■□□□□ 0.76
PCDH1Q08174 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PCDH1Q08174 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH1Q08174 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH1Q08174 AC020907.5-201ENST00000624372 1936 ntBASIC19.77■□□□□ 0.76
PCDH1Q08174 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH1Q08174 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH1Q08174 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDH1Q08174 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH1Q08174 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.77■□□□□ 0.76
PCDH1Q08174 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDH1Q08174 FAM21FP-204ENST00000608637 956 ntBASIC19.77■□□□□ 0.76
PCDH1Q08174 MIR5787-201ENST00000611784 55 ntBASIC19.77■□□□□ 0.76
PCDH1Q08174 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDH1Q08174 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH1Q08174 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH1Q08174 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PCDH1Q08174 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH1Q08174 FP700111.2-201ENST00000619190 1892 ntBASIC19.77■□□□□ 0.76
PCDH1Q08174 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDH1Q08174 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH1Q08174 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PCDH1Q08174 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH1Q08174 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDH1Q08174 AL121603.2-201ENST00000557373 2117 ntBASIC19.76■□□□□ 0.75
PCDH1Q08174 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PCDH1Q08174 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH1Q08174 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH1Q08174 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDH1Q08174 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDH1Q08174 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH1Q08174 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH1Q08174 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.76■□□□□ 0.75
PCDH1Q08174 CDV3P1-201ENST00000471403 739 ntBASIC19.76■□□□□ 0.75
PCDH1Q08174 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH1Q08174 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
PCDH1Q08174 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH1Q08174 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
PCDH1Q08174 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDH1Q08174 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH1Q08174 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH1Q08174 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH1Q08174 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH1Q08174 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDH1Q08174 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH1Q08174 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH1Q08174 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDH1Q08174 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH1Q08174 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDH1Q08174 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDH1Q08174 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PCDH1Q08174 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH1Q08174 AL591742.1-201ENST00000604433 565 ntBASIC19.75■□□□□ 0.75
PCDH1Q08174 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH1Q08174 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
PCDH1Q08174 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH1Q08174 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDH1Q08174 LINC01006-201ENST00000333319 2292 ntBASIC19.74■□□□□ 0.75
PCDH1Q08174 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH1Q08174 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH1Q08174 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH1Q08174 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH1Q08174 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH1Q08174 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDH1Q08174 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH1Q08174 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH1Q08174 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH1Q08174 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH1Q08174 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDH1Q08174 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PCDH1Q08174 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH1Q08174 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms