Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 HHT2YNL031C 411 nt1.33□□□□□ -2.2
HRD1Q08109 FYV12YOR183W 390 nt1.33□□□□□ -2.2
HRD1Q08109 SPO24YPR036W-A 204 nt1.33□□□□□ -2.2
HRD1Q08109 YBP1YBR216C 2025 nt1.33□□□□□ -2.2
HRD1Q08109 YOR343W-BYOR343W-B 5313 nt1.32□□□□□ -2.2
HRD1Q08109 NCB2YDR397C 441 nt1.32□□□□□ -2.2
HRD1Q08109 LSM4YER112W 564 nt1.32□□□□□ -2.2
HRD1Q08109 IMP3YHR148W 552 nt1.32□□□□□ -2.2
HRD1Q08109 YKL115CYKL115C 393 nt1.32□□□□□ -2.2
HRD1Q08109 MIX23YBL107C 591 nt1.32□□□□□ -2.2
HRD1Q08109 SPC29YPL124W 762 nt1.32□□□□□ -2.2
HRD1Q08109 CDC53YDL132W 2448 nt1.32□□□□□ -2.2
HRD1Q08109 YGL069CYGL069C 465 nt1.31□□□□□ -2.2
HRD1Q08109 YJL032WYJL032W 315 nt1.31□□□□□ -2.2
HRD1Q08109 CCH1YGR217W 6120 nt1.31□□□□□ -2.2
HRD1Q08109 ADR1YDR216W 3972 nt1.3□□□□□ -2.2
HRD1Q08109 KCS1YDR017C 3153 nt1.3□□□□□ -2.2
HRD1Q08109 TRM3YDL112W 4311 nt1.3□□□□□ -2.2
HRD1Q08109 MAM1YER106W 909 nt1.3□□□□□ -2.2
HRD1Q08109 YGL242CYGL242C 546 nt1.3□□□□□ -2.2
HRD1Q08109 YGR053CYGR053C 852 nt1.3□□□□□ -2.2
HRD1Q08109 YMR052C-AYMR052C-A 366 nt1.3□□□□□ -2.2
HRD1Q08109 YBR292CYBR292C 372 nt1.3□□□□□ -2.2
HRD1Q08109 TVP15YDR100W 432 nt1.29□□□□□ -2.2
HRD1Q08109 GIC2YDR309C 1152 nt1.29□□□□□ -2.2
HRD1Q08109 YFR056CYFR056C 369 nt1.29□□□□□ -2.2
HRD1Q08109 SFM1YOR021C 642 nt1.29□□□□□ -2.2
HRD1Q08109 ARP5YNL059C 2268 nt1.29□□□□□ -2.2
HRD1Q08109 NUR1YDL089W 1455 nt1.29□□□□□ -2.2
HRD1Q08109 MON2YNL297C 4911 nt1.28□□□□□ -2.2
HRD1Q08109 NAN1YPL126W 2691 nt1.28□□□□□ -2.2
HRD1Q08109 YDR250CYDR250C 276 nt1.28□□□□□ -2.2
HRD1Q08109 HOP2YGL033W 657 nt1.28□□□□□ -2.2
HRD1Q08109 YIL102CYIL102C 306 nt1.28□□□□□ -2.2
HRD1Q08109 RRI1YDL216C 1323 nt1.28□□□□□ -2.2
HRD1Q08109 PIG2YIL045W 1617 nt1.28□□□□□ -2.2
HRD1Q08109 MSH6YDR097C 3729 nt1.28□□□□□ -2.21
HRD1Q08109 CAT8YMR280C 4302 nt1.27□□□□□ -2.21
HRD1Q08109 NSE4YDL105W 1209 nt1.27□□□□□ -2.21
HRD1Q08109 YGL165CYGL165C 579 nt1.27□□□□□ -2.21
HRD1Q08109 TRX1YLR043C 312 nt1.27□□□□□ -2.21
HRD1Q08109 YLR163W-AYLR163W-A 114 nt1.27□□□□□ -2.21
HRD1Q08109 COA6YMR244C-A 315 nt1.27□□□□□ -2.21
HRD1Q08109 BI3Q0115 1554 nt1.26□□□□□ -2.21
HRD1Q08109 RBK1YCR036W 1002 nt1.26□□□□□ -2.21
HRD1Q08109 FMP16YDR070C 282 nt1.26□□□□□ -2.21
HRD1Q08109 MEI4YER044C-A 1227 nt1.26□□□□□ -2.21
HRD1Q08109 tQ(UUG)E2tQ(UUG)E2 72 nt1.26□□□□□ -2.21
HRD1Q08109 YHR073W-AYHR073W-A 177 nt1.26□□□□□ -2.21
HRD1Q08109 RFA3YJL173C 369 nt1.26□□□□□ -2.21
HRD1Q08109 RRT16YNL105W 429 nt1.26□□□□□ -2.21
HRD1Q08109 SEC21YNL287W 2808 nt1.25□□□□□ -2.21
HRD1Q08109 CST9YLR394W 1449 nt1.25□□□□□ -2.21
HRD1Q08109 ESA1YOR244W 1338 nt1.25□□□□□ -2.21
HRD1Q08109 ATP16YDL004W 483 nt1.25□□□□□ -2.21
HRD1Q08109 BTT1YDR252W 450 nt1.25□□□□□ -2.21
HRD1Q08109 MSL1YIR009W 336 nt1.25□□□□□ -2.21
HRD1Q08109 SNC1YAL030W 354 nt1.25□□□□□ -2.21
HRD1Q08109 VPS25YJR102C 609 nt1.25□□□□□ -2.21
HRD1Q08109 YNR021WYNR021W 1215 nt1.25□□□□□ -2.21
HRD1Q08109 YOL118CYOL118C 309 nt1.25□□□□□ -2.21
HRD1Q08109 GRE2YOL151W 1029 nt1.25□□□□□ -2.21
HRD1Q08109 RXT2YBR095C 1293 nt1.25□□□□□ -2.21
HRD1Q08109 ADF1YCL058W-A 342 nt1.25□□□□□ -2.21
HRD1Q08109 PBY1YBR094W 2262 nt1.24□□□□□ -2.21
HRD1Q08109 SPO22YIL073C 2928 nt1.24□□□□□ -2.21
HRD1Q08109 STB4YMR019W 2850 nt1.24□□□□□ -2.21
HRD1Q08109 PTC5YOR090C 1719 nt1.24□□□□□ -2.21
HRD1Q08109 CDC50YCR094W 1176 nt1.24□□□□□ -2.21
HRD1Q08109 YDR199WYDR199W 366 nt1.24□□□□□ -2.21
HRD1Q08109 YGL024WYGL024W 336 nt1.24□□□□□ -2.21
HRD1Q08109 YHR022CYHR022C 771 nt1.24□□□□□ -2.21
HRD1Q08109 YHR052W-AYHR052W-A 195 nt1.24□□□□□ -2.21
HRD1Q08109 YHR054W-AYHR054W-A 195 nt1.24□□□□□ -2.21
HRD1Q08109 TPM2YIL138C 486 nt1.24□□□□□ -2.21
HRD1Q08109 SEN15YMR059W 387 nt1.24□□□□□ -2.21
HRD1Q08109 IRC14YOR135C 342 nt1.24□□□□□ -2.21
HRD1Q08109 CIN2YPL241C 807 nt1.24□□□□□ -2.21
HRD1Q08109 AME1YBR211C 975 nt1.24□□□□□ -2.21
HRD1Q08109 SEC63YOR254C 1992 nt1.24□□□□□ -2.21
HRD1Q08109 MAD1YGL086W 2250 nt1.24□□□□□ -2.21
HRD1Q08109 NUP192YJL039C 5052 nt1.24□□□□□ -2.21
HRD1Q08109 SPC98YNL126W 2541 nt1.23□□□□□ -2.21
HRD1Q08109 SLK19YOR195W 2466 nt1.23□□□□□ -2.21
HRD1Q08109 UBC9YDL064W 474 nt1.23□□□□□ -2.21
HRD1Q08109 YDR286CYDR286C 345 nt1.23□□□□□ -2.21
HRD1Q08109 AIM23YJL131C 1071 nt1.23□□□□□ -2.21
HRD1Q08109 SUI2YJR007W 915 nt1.23□□□□□ -2.21
HRD1Q08109 SRP21YKL122C 504 nt1.23□□□□□ -2.21
HRD1Q08109 CSI1YMR025W 888 nt1.23□□□□□ -2.21
HRD1Q08109 CUP9YPL177C 921 nt1.23□□□□□ -2.21
HRD1Q08109 YPR177CYPR177C 372 nt1.23□□□□□ -2.21
HRD1Q08109 snR24snR24 89 nt1.23□□□□□ -2.21
HRD1Q08109 CTF13YMR094W 1437 nt1.23□□□□□ -2.21
HRD1Q08109 SKI3YPR189W 4299 nt1.23□□□□□ -2.21
HRD1Q08109 GRR1YJR090C 3456 nt1.23□□□□□ -2.21
HRD1Q08109 ECM25YJL201W 1800 nt1.22□□□□□ -2.21
HRD1Q08109 RVS161YCR009C 798 nt1.22□□□□□ -2.21
HRD1Q08109 CDC36YDL165W 576 nt1.22□□□□□ -2.21
HRD1Q08109 YLR140WYLR140W 327 nt1.22□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 20.8 ms