Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL10A1Q03692 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL10A1Q03692 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL10A1Q03692 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.27■□□□□ 0.36
COL10A1Q03692 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL10A1Q03692 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.27■□□□□ 0.36
COL10A1Q03692 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.27■□□□□ 0.36
COL10A1Q03692 AL162430.1-201ENST00000480705 870 ntBASIC17.27■□□□□ 0.36
COL10A1Q03692 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.27■□□□□ 0.36
COL10A1Q03692 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.27■□□□□ 0.36
COL10A1Q03692 AC243732.1-201ENST00000612648 864 ntBASIC17.27■□□□□ 0.36
COL10A1Q03692 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL10A1Q03692 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
COL10A1Q03692 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.27■□□□□ 0.35
COL10A1Q03692 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL10A1Q03692 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
COL10A1Q03692 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL10A1Q03692 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
COL10A1Q03692 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
COL10A1Q03692 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
COL10A1Q03692 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.26■□□□□ 0.35
COL10A1Q03692 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
COL10A1Q03692 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.26■□□□□ 0.35
COL10A1Q03692 AC116050.2-201ENST00000612102 1779 ntBASIC17.26■□□□□ 0.35
COL10A1Q03692 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
COL10A1Q03692 AC016769.1-201ENST00000409132 1010 ntBASIC17.26■□□□□ 0.35
COL10A1Q03692 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.26■□□□□ 0.35
COL10A1Q03692 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
COL10A1Q03692 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
COL10A1Q03692 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.26■□□□□ 0.35
COL10A1Q03692 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.26■□□□□ 0.35
COL10A1Q03692 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
COL10A1Q03692 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.26■□□□□ 0.35
COL10A1Q03692 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.26■□□□□ 0.35
COL10A1Q03692 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
COL10A1Q03692 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
COL10A1Q03692 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
COL10A1Q03692 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL10A1Q03692 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL10A1Q03692 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL10A1Q03692 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.25■□□□□ 0.35
COL10A1Q03692 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.25■□□□□ 0.35
COL10A1Q03692 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL10A1Q03692 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.25■□□□□ 0.35
COL10A1Q03692 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
COL10A1Q03692 KRT18P11-201ENST00000435214 1283 ntBASIC17.25■□□□□ 0.35
COL10A1Q03692 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.25■□□□□ 0.35
COL10A1Q03692 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
COL10A1Q03692 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.25■□□□□ 0.35
COL10A1Q03692 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.25■□□□□ 0.35
COL10A1Q03692 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
COL10A1Q03692 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL10A1Q03692 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL10A1Q03692 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
COL10A1Q03692 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL10A1Q03692 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL10A1Q03692 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.25■□□□□ 0.35
COL10A1Q03692 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL10A1Q03692 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL10A1Q03692 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COL10A1Q03692 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.24■□□□□ 0.35
COL10A1Q03692 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL10A1Q03692 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL10A1Q03692 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL10A1Q03692 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL10A1Q03692 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
COL10A1Q03692 AC091799.1-201ENST00000422823 811 ntBASIC17.24■□□□□ 0.35
COL10A1Q03692 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
COL10A1Q03692 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COL10A1Q03692 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.24■□□□□ 0.35
COL10A1Q03692 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL10A1Q03692 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL10A1Q03692 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL10A1Q03692 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL10A1Q03692 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.24■□□□□ 0.35
COL10A1Q03692 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL10A1Q03692 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL10A1Q03692 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
COL10A1Q03692 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL10A1Q03692 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL10A1Q03692 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.23■□□□□ 0.35
COL10A1Q03692 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL10A1Q03692 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms