Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.51■□□□□ 0.71
RAE1P78406 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.51■□□□□ 0.71
RAE1P78406 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAE1P78406 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.51■□□□□ 0.71
RAE1P78406 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.51■□□□□ 0.71
RAE1P78406 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAE1P78406 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAE1P78406 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAE1P78406 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAE1P78406 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAE1P78406 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.51■□□□□ 0.71
RAE1P78406 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.51■□□□□ 0.71
RAE1P78406 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.51■□□□□ 0.71
RAE1P78406 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.51■□□□□ 0.71
RAE1P78406 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.5■□□□□ 0.71
RAE1P78406 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAE1P78406 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RAE1P78406 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAE1P78406 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAE1P78406 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAE1P78406 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAE1P78406 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAE1P78406 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.5■□□□□ 0.71
RAE1P78406 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAE1P78406 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAE1P78406 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAE1P78406 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.5■□□□□ 0.71
RAE1P78406 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.5■□□□□ 0.71
RAE1P78406 AC007322.3-201ENST00000426526 701 ntBASIC19.5■□□□□ 0.71
RAE1P78406 KRT18P5-201ENST00000436075 1291 ntBASIC19.5■□□□□ 0.71
RAE1P78406 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAE1P78406 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.5■□□□□ 0.71
RAE1P78406 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.5■□□□□ 0.71
RAE1P78406 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.5■□□□□ 0.71
RAE1P78406 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.5■□□□□ 0.71
RAE1P78406 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAE1P78406 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.5■□□□□ 0.71
RAE1P78406 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAE1P78406 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAE1P78406 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAE1P78406 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAE1P78406 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.49■□□□□ 0.71
RAE1P78406 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RAE1P78406 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAE1P78406 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAE1P78406 PKD1P6-201ENST00000343738 4769 ntBASIC19.49■□□□□ 0.71
RAE1P78406 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAE1P78406 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.49■□□□□ 0.71
RAE1P78406 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAE1P78406 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RAE1P78406 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RAE1P78406 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAE1P78406 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
RAE1P78406 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.49■□□□□ 0.71
RAE1P78406 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.49■□□□□ 0.71
RAE1P78406 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.49■□□□□ 0.71
RAE1P78406 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.49■□□□□ 0.71
RAE1P78406 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RAE1P78406 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.49■□□□□ 0.71
RAE1P78406 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.49■□□□□ 0.71
RAE1P78406 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.49■□□□□ 0.71
RAE1P78406 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RAE1P78406 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.49■□□□□ 0.71
RAE1P78406 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
RAE1P78406 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAE1P78406 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAE1P78406 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.49■□□□□ 0.71
RAE1P78406 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAE1P78406 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAE1P78406 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAE1P78406 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RAE1P78406 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAE1P78406 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAE1P78406 AC092720.2-201ENST00000602388 1665 ntBASIC19.48■□□□□ 0.71
RAE1P78406 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.48■□□□□ 0.71
RAE1P78406 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAE1P78406 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAE1P78406 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.47■□□□□ 0.71
RAE1P78406 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAE1P78406 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAE1P78406 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAE1P78406 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.47■□□□□ 0.71
RAE1P78406 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAE1P78406 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAE1P78406 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.47■□□□□ 0.71
RAE1P78406 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.47■□□□□ 0.71
RAE1P78406 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.47■□□□□ 0.71
RAE1P78406 RARRES2P6-201ENST00000567333 442 ntBASIC19.47■□□□□ 0.71
RAE1P78406 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RAE1P78406 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAE1P78406 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RAE1P78406 AL391422.3-201ENST00000603791 2761 ntBASIC19.47■□□□□ 0.71
RAE1P78406 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAE1P78406 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
RAE1P78406 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAE1P78406 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.46■□□□□ 0.71
RAE1P78406 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.46■□□□□ 0.71
RAE1P78406 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
RAE1P78406 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RAE1P78406 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms