Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LSM6P62312 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.02■□□□□ 0.48
LSM6P62312 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.02■□□□□ 0.48
LSM6P62312 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.02■□□□□ 0.48
LSM6P62312 TERF1P5-201ENST00000477545 1207 ntBASIC18.02■□□□□ 0.48
LSM6P62312 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LSM6P62312 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.02■□□□□ 0.48
LSM6P62312 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.02■□□□□ 0.48
LSM6P62312 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LSM6P62312 AC010536.3-201ENST00000620306 533 ntBASIC18.02■□□□□ 0.48
LSM6P62312 MIR2861-201ENST00000636310 90 ntBASIC18.02■□□□□ 0.48
LSM6P62312 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LSM6P62312 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LSM6P62312 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSM6P62312 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSM6P62312 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSM6P62312 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.01■□□□□ 0.47
LSM6P62312 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.01■□□□□ 0.47
LSM6P62312 AC137761.2-201ENST00000561729 223 ntBASIC18.01■□□□□ 0.47
LSM6P62312 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.01■□□□□ 0.47
LSM6P62312 AC145350.3-201ENST00000569033 163 ntBASIC18.01■□□□□ 0.47
LSM6P62312 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.01■□□□□ 0.47
LSM6P62312 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LSM6P62312 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.01■□□□□ 0.47
LSM6P62312 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.01■□□□□ 0.47
LSM6P62312 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSM6P62312 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LSM6P62312 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LSM6P62312 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSM6P62312 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.01■□□□□ 0.47
LSM6P62312 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSM6P62312 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSM6P62312 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSM6P62312 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSM6P62312 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LSM6P62312 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LSM6P62312 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
LSM6P62312 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18■□□□□ 0.47
LSM6P62312 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LSM6P62312 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LSM6P62312 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LSM6P62312 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LSM6P62312 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18■□□□□ 0.47
LSM6P62312 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18■□□□□ 0.47
LSM6P62312 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18■□□□□ 0.47
LSM6P62312 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18■□□□□ 0.47
LSM6P62312 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18■□□□□ 0.47
LSM6P62312 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18■□□□□ 0.47
LSM6P62312 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18■□□□□ 0.47
LSM6P62312 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18■□□□□ 0.47
LSM6P62312 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LSM6P62312 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18■□□□□ 0.47
LSM6P62312 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LSM6P62312 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18■□□□□ 0.47
LSM6P62312 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LSM6P62312 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LSM6P62312 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18■□□□□ 0.47
LSM6P62312 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18■□□□□ 0.47
LSM6P62312 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18■□□□□ 0.47
LSM6P62312 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LSM6P62312 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LSM6P62312 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LSM6P62312 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LSM6P62312 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LSM6P62312 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LSM6P62312 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
LSM6P62312 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LSM6P62312 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LSM6P62312 AC007322.4-201ENST00000509611 723 ntBASIC17.99■□□□□ 0.47
LSM6P62312 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.99■□□□□ 0.47
LSM6P62312 AL162412.1-201ENST00000567129 965 ntBASIC17.99■□□□□ 0.47
LSM6P62312 AL591742.1-201ENST00000604433 565 ntBASIC17.99■□□□□ 0.47
LSM6P62312 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
LSM6P62312 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LSM6P62312 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.99■□□□□ 0.47
LSM6P62312 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LSM6P62312 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSM6P62312 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.98■□□□□ 0.47
LSM6P62312 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.98■□□□□ 0.47
LSM6P62312 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSM6P62312 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LSM6P62312 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.98■□□□□ 0.47
LSM6P62312 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LSM6P62312 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LSM6P62312 FAM21FP-204ENST00000608637 956 ntBASIC17.98■□□□□ 0.47
LSM6P62312 MIR5787-201ENST00000611784 55 ntBASIC17.98■□□□□ 0.47
LSM6P62312 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.98■□□□□ 0.47
LSM6P62312 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.98■□□□□ 0.47
LSM6P62312 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSM6P62312 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LSM6P62312 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSM6P62312 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSM6P62312 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LSM6P62312 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LSM6P62312 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LSM6P62312 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSM6P62312 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.97■□□□□ 0.47
LSM6P62312 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.97■□□□□ 0.47
LSM6P62312 AC092720.2-201ENST00000602388 1665 ntBASIC17.97■□□□□ 0.47
LSM6P62312 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms