Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
SPCS3P61009 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPCS3P61009 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.62■□□□□ 0.25
SPCS3P61009 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.62■□□□□ 0.25
SPCS3P61009 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SPCS3P61009 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPCS3P61009 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.62■□□□□ 0.25
SPCS3P61009 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SPCS3P61009 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPCS3P61009 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
SPCS3P61009 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SPCS3P61009 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPCS3P61009 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.62■□□□□ 0.25
SPCS3P61009 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SPCS3P61009 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPCS3P61009 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPCS3P61009 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SPCS3P61009 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPCS3P61009 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPCS3P61009 UNC93B3-201ENST00000308076 687 ntBASIC16.62■□□□□ 0.25
SPCS3P61009 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPCS3P61009 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPCS3P61009 AL136116.3-201ENST00000402907 1138 ntBASIC16.62■□□□□ 0.25
SPCS3P61009 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SPCS3P61009 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SPCS3P61009 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.62■□□□□ 0.25
SPCS3P61009 AC105233.4-201ENST00000642045 216 ntBASIC16.62■□□□□ 0.25
SPCS3P61009 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SPCS3P61009 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPCS3P61009 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPCS3P61009 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.62■□□□□ 0.25
SPCS3P61009 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SPCS3P61009 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SPCS3P61009 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
SPCS3P61009 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
SPCS3P61009 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SPCS3P61009 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SPCS3P61009 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SPCS3P61009 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SPCS3P61009 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SPCS3P61009 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SPCS3P61009 FP700111.2-201ENST00000619190 1892 ntBASIC16.61■□□□□ 0.25
SPCS3P61009 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SPCS3P61009 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SPCS3P61009 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.61■□□□□ 0.25
SPCS3P61009 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SPCS3P61009 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.61■□□□□ 0.25
SPCS3P61009 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.61■□□□□ 0.25
SPCS3P61009 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SPCS3P61009 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
SPCS3P61009 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SPCS3P61009 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SPCS3P61009 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.61■□□□□ 0.25
SPCS3P61009 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SPCS3P61009 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SPCS3P61009 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SPCS3P61009 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SPCS3P61009 BX005040.4-201ENST00000637145 1518 ntBASIC16.6■□□□□ 0.25
SPCS3P61009 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPCS3P61009 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPCS3P61009 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPCS3P61009 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPCS3P61009 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SPCS3P61009 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPCS3P61009 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.6■□□□□ 0.25
SPCS3P61009 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SPCS3P61009 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.6■□□□□ 0.25
SPCS3P61009 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SPCS3P61009 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPCS3P61009 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPCS3P61009 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.6■□□□□ 0.25
SPCS3P61009 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.6■□□□□ 0.25
SPCS3P61009 AC011484.1-201ENST00000377652 1995 ntBASIC16.6■□□□□ 0.25
SPCS3P61009 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SPCS3P61009 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPCS3P61009 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPCS3P61009 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPCS3P61009 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SPCS3P61009 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.59■□□□□ 0.25
SPCS3P61009 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SPCS3P61009 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.59■□□□□ 0.25
SPCS3P61009 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPCS3P61009 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.59■□□□□ 0.25
SPCS3P61009 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SPCS3P61009 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SPCS3P61009 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPCS3P61009 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
SPCS3P61009 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPCS3P61009 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPCS3P61009 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPCS3P61009 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.59■□□□□ 0.25
SPCS3P61009 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.59■□□□□ 0.25
SPCS3P61009 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.59■□□□□ 0.25
SPCS3P61009 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SPCS3P61009 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.59■□□□□ 0.25
SPCS3P61009 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.59■□□□□ 0.25
SPCS3P61009 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.59■□□□□ 0.25
SPCS3P61009 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPCS3P61009 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPCS3P61009 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms