Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.02■□□□□ 0.48
FOXG1P55316 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.02■□□□□ 0.48
FOXG1P55316 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXG1P55316 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXG1P55316 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.02■□□□□ 0.48
FOXG1P55316 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXG1P55316 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
FOXG1P55316 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXG1P55316 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXG1P55316 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.02■□□□□ 0.47
FOXG1P55316 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXG1P55316 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXG1P55316 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXG1P55316 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXG1P55316 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXG1P55316 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXG1P55316 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXG1P55316 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.01■□□□□ 0.47
FOXG1P55316 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXG1P55316 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXG1P55316 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.01■□□□□ 0.47
FOXG1P55316 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.01■□□□□ 0.47
FOXG1P55316 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.01■□□□□ 0.47
FOXG1P55316 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.01■□□□□ 0.47
FOXG1P55316 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.01■□□□□ 0.47
FOXG1P55316 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXG1P55316 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.01■□□□□ 0.47
FOXG1P55316 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXG1P55316 AC027702.1-201ENST00000563810 1770 ntBASIC18.01■□□□□ 0.47
FOXG1P55316 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.01■□□□□ 0.47
FOXG1P55316 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.01■□□□□ 0.47
FOXG1P55316 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXG1P55316 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXG1P55316 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXG1P55316 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
FOXG1P55316 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXG1P55316 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
FOXG1P55316 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18■□□□□ 0.47
FOXG1P55316 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18■□□□□ 0.47
FOXG1P55316 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXG1P55316 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXG1P55316 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
FOXG1P55316 KRT18P68-201ENST00000392293 1000 ntBASIC18■□□□□ 0.47
FOXG1P55316 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXG1P55316 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
FOXG1P55316 AC069152.1-201ENST00000438030 544 ntBASIC18■□□□□ 0.47
FOXG1P55316 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18■□□□□ 0.47
FOXG1P55316 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18■□□□□ 0.47
FOXG1P55316 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18■□□□□ 0.47
FOXG1P55316 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
FOXG1P55316 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXG1P55316 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
FOXG1P55316 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXG1P55316 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18■□□□□ 0.47
FOXG1P55316 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
FOXG1P55316 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXG1P55316 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXG1P55316 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXG1P55316 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXG1P55316 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXG1P55316 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18■□□□□ 0.47
FOXG1P55316 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18■□□□□ 0.47
FOXG1P55316 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
FOXG1P55316 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXG1P55316 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXG1P55316 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.99■□□□□ 0.47
FOXG1P55316 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXG1P55316 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXG1P55316 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXG1P55316 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXG1P55316 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXG1P55316 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.99■□□□□ 0.47
FOXG1P55316 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
FOXG1P55316 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.99■□□□□ 0.47
FOXG1P55316 MIR4758-201ENST00000577688 71 ntBASIC17.99■□□□□ 0.47
FOXG1P55316 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
FOXG1P55316 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.99■□□□□ 0.47
FOXG1P55316 AC092118.2-201ENST00000613495 667 ntBASIC17.99■□□□□ 0.47
FOXG1P55316 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
FOXG1P55316 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.99■□□□□ 0.47
FOXG1P55316 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
FOXG1P55316 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXG1P55316 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXG1P55316 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXG1P55316 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
FOXG1P55316 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXG1P55316 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXG1P55316 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXG1P55316 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXG1P55316 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXG1P55316 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.98■□□□□ 0.47
FOXG1P55316 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXG1P55316 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXG1P55316 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXG1P55316 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXG1P55316 LSM12P1-201ENST00000411836 588 ntBASIC17.98■□□□□ 0.47
FOXG1P55316 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXG1P55316 DUSP5P2-201ENST00000426873 1033 ntBASIC17.98■□□□□ 0.47
FOXG1P55316 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXG1P55316 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms