Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDH11P55287 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH11P55287 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH11P55287 PCDHAC2-203ENST00000615316 3011 ntBASIC18.74■□□□□ 0.59
CDH11P55287 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH11P55287 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH11P55287 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH11P55287 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CDH11P55287 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDH11P55287 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH11P55287 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH11P55287 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.74■□□□□ 0.59
CDH11P55287 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH11P55287 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH11P55287 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
CDH11P55287 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CDH11P55287 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH11P55287 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CDH11P55287 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH11P55287 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH11P55287 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH11P55287 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH11P55287 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH11P55287 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CDH11P55287 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDH11P55287 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH11P55287 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH11P55287 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CDH11P55287 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH11P55287 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH11P55287 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
CDH11P55287 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
CDH11P55287 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.73■□□□□ 0.59
CDH11P55287 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDH11P55287 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH11P55287 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH11P55287 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CDH11P55287 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH11P55287 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH11P55287 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH11P55287 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH11P55287 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH11P55287 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH11P55287 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH11P55287 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDH11P55287 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH11P55287 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH11P55287 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH11P55287 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH11P55287 AC007225.1-201ENST00000566331 1836 ntBASIC18.72■□□□□ 0.59
CDH11P55287 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH11P55287 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CDH11P55287 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH11P55287 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH11P55287 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH11P55287 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH11P55287 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CDH11P55287 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH11P55287 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.72■□□□□ 0.59
CDH11P55287 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH11P55287 AC092437.1-201ENST00000624794 1048 ntBASIC18.72■□□□□ 0.59
CDH11P55287 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH11P55287 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH11P55287 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
CDH11P55287 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH11P55287 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH11P55287 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH11P55287 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
CDH11P55287 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH11P55287 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH11P55287 AC020907.5-201ENST00000624372 1936 ntBASIC18.71■□□□□ 0.59
CDH11P55287 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH11P55287 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH11P55287 AC004911.1-201ENST00000416316 871 ntBASIC18.71■□□□□ 0.59
CDH11P55287 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH11P55287 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.71■□□□□ 0.59
CDH11P55287 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH11P55287 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH11P55287 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.71■□□□□ 0.59
CDH11P55287 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CDH11P55287 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH11P55287 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CDH11P55287 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
CDH11P55287 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH11P55287 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH11P55287 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH11P55287 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH11P55287 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH11P55287 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CDH11P55287 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDH11P55287 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH11P55287 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH11P55287 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH11P55287 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH11P55287 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH11P55287 RARRES2P11-201ENST00000635158 484 ntBASIC18.7■□□□□ 0.58
CDH11P55287 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH11P55287 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH11P55287 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH11P55287 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms