Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDH6P55285 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
CDH6P55285 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CDH6P55285 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.34■■□□□ 1.01
CDH6P55285 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH6P55285 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.34■■□□□ 1.01
CDH6P55285 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.34■■□□□ 1.01
CDH6P55285 AC137761.2-201ENST00000561729 223 ntBASIC21.34■■□□□ 1.01
CDH6P55285 AC145350.3-201ENST00000569033 163 ntBASIC21.34■■□□□ 1.01
CDH6P55285 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.34■■□□□ 1.01
CDH6P55285 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDH6P55285 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH6P55285 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDH6P55285 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH6P55285 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDH6P55285 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.34■■□□□ 1.01
CDH6P55285 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDH6P55285 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDH6P55285 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDH6P55285 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CDH6P55285 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.33■■□□□ 1.01
CDH6P55285 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.33■■□□□ 1.01
CDH6P55285 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDH6P55285 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CDH6P55285 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
CDH6P55285 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CDH6P55285 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CDH6P55285 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.33■■□□□ 1.01
CDH6P55285 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.33■■□□□ 1.01
CDH6P55285 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.33■■□□□ 1.01
CDH6P55285 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDH6P55285 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDH6P55285 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDH6P55285 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.33■■□□□ 1
CDH6P55285 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.33■■□□□ 1
CDH6P55285 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CDH6P55285 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CDH6P55285 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDH6P55285 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
CDH6P55285 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDH6P55285 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1
CDH6P55285 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CDH6P55285 GABARAPL3-202ENST00000624044 1851 ntBASIC21.32■■□□□ 1
CDH6P55285 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CDH6P55285 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDH6P55285 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDH6P55285 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDH6P55285 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDH6P55285 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.32■■□□□ 1
CDH6P55285 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.31■■□□□ 1
CDH6P55285 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH6P55285 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH6P55285 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CDH6P55285 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH6P55285 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CDH6P55285 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.31■■□□□ 1
CDH6P55285 AC007322.3-201ENST00000426526 701 ntBASIC21.31■■□□□ 1
CDH6P55285 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDH6P55285 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.31■■□□□ 1
CDH6P55285 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.31■■□□□ 1
CDH6P55285 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.31■■□□□ 1
CDH6P55285 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.31■■□□□ 1
CDH6P55285 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CDH6P55285 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
CDH6P55285 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CDH6P55285 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CDH6P55285 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.31■■□□□ 1
CDH6P55285 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH6P55285 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
CDH6P55285 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDH6P55285 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CDH6P55285 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CDH6P55285 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.31■■□□□ 1
CDH6P55285 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDH6P55285 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.3■■□□□ 1
CDH6P55285 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH6P55285 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CDH6P55285 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CDH6P55285 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CDH6P55285 AC073130.3-201ENST00000624389 2278 ntBASIC21.3■■□□□ 1
CDH6P55285 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDH6P55285 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.3■■□□□ 1
CDH6P55285 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.3■■□□□ 1
CDH6P55285 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH6P55285 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH6P55285 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CDH6P55285 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH6P55285 AL121603.2-201ENST00000557373 2117 ntBASIC21.3■■□□□ 1
CDH6P55285 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CDH6P55285 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
CDH6P55285 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
CDH6P55285 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDH6P55285 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.3■■□□□ 1
CDH6P55285 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDH6P55285 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CDH6P55285 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
CDH6P55285 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CDH6P55285 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH6P55285 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.29■■□□□ 1
CDH6P55285 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms