Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.53■■□□□ 1.04
ATXN1P54253 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.53■■□□□ 1.04
ATXN1P54253 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN1P54253 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.53■■□□□ 1.04
ATXN1P54253 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
ATXN1P54253 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN1P54253 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN1P54253 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN1P54253 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ATXN1P54253 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN1P54253 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN1P54253 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
ATXN1P54253 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.52■■□□□ 1.04
ATXN1P54253 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN1P54253 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN1P54253 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN1P54253 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.52■■□□□ 1.04
ATXN1P54253 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.52■■□□□ 1.04
ATXN1P54253 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ATXN1P54253 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN1P54253 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ATXN1P54253 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.52■■□□□ 1.03
ATXN1P54253 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.52■■□□□ 1.03
ATXN1P54253 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
ATXN1P54253 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.51■■□□□ 1.03
ATXN1P54253 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN1P54253 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN1P54253 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN1P54253 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ATXN1P54253 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN1P54253 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.51■■□□□ 1.03
ATXN1P54253 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.51■■□□□ 1.03
ATXN1P54253 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.51■■□□□ 1.03
ATXN1P54253 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN1P54253 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN1P54253 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN1P54253 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
ATXN1P54253 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.51■■□□□ 1.03
ATXN1P54253 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.51■■□□□ 1.03
ATXN1P54253 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.51■■□□□ 1.03
ATXN1P54253 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN1P54253 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ATXN1P54253 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ATXN1P54253 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN1P54253 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.5■■□□□ 1.03
ATXN1P54253 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ATXN1P54253 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
ATXN1P54253 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.5■■□□□ 1.03
ATXN1P54253 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN1P54253 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ATXN1P54253 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN1P54253 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.5■■□□□ 1.03
ATXN1P54253 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN1P54253 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ATXN1P54253 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ATXN1P54253 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN1P54253 AC105036.2-201ENST00000569468 176 ntBASIC21.5■■□□□ 1.03
ATXN1P54253 AC016405.3-201ENST00000607710 860 ntBASIC21.5■■□□□ 1.03
ATXN1P54253 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.5■■□□□ 1.03
ATXN1P54253 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN1P54253 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN1P54253 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.5■■□□□ 1.03
ATXN1P54253 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN1P54253 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ATXN1P54253 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN1P54253 AC011484.1-201ENST00000377652 1995 ntBASIC21.5■■□□□ 1.03
ATXN1P54253 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN1P54253 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN1P54253 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
ATXN1P54253 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN1P54253 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN1P54253 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN1P54253 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.49■■□□□ 1.03
ATXN1P54253 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATXN1P54253 AC116050.2-201ENST00000612102 1779 ntBASIC21.49■■□□□ 1.03
ATXN1P54253 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.49■■□□□ 1.03
ATXN1P54253 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.49■■□□□ 1.03
ATXN1P54253 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.49■■□□□ 1.03
ATXN1P54253 AC013268.1-206ENST00000638368 961 ntBASIC21.49■■□□□ 1.03
ATXN1P54253 AC112229.1-201ENST00000639295 961 ntBASIC21.49■■□□□ 1.03
ATXN1P54253 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
ATXN1P54253 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATXN1P54253 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATXN1P54253 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATXN1P54253 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ATXN1P54253 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ATXN1P54253 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
ATXN1P54253 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATXN1P54253 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATXN1P54253 AC068338.2-201ENST00000563278 1430 ntBASIC21.48■■□□□ 1.03
ATXN1P54253 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATXN1P54253 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATXN1P54253 AC006128.1-201ENST00000624704 1661 ntBASIC21.48■■□□□ 1.03
ATXN1P54253 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
ATXN1P54253 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATXN1P54253 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.48■■□□□ 1.03
ATXN1P54253 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.48■■□□□ 1.03
ATXN1P54253 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.48■■□□□ 1.03
ATXN1P54253 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.48■■□□□ 1.03
ATXN1P54253 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms